Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   GL2_RS05540 Genome accession   NZ_AP019807
Coordinates   1295229..1295624 (-) Length   131 a.a.
NCBI ID   WP_020413651.1    Uniprot ID   -
Organism   Microbulbifer sp. GL-2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1290229..1300624
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GL2_RS05525 (GL2_11220) - 1291764..1293905 (-) 2142 WP_143729659.1 methyl-accepting chemotaxis protein -
  GL2_RS05530 (GL2_11230) - 1294070..1294609 (-) 540 WP_143729660.1 chemotaxis protein CheW -
  GL2_RS05535 (GL2_11240) pilH 1294626..1294988 (-) 363 WP_143729661.1 twitching motility response regulator PilH -
  GL2_RS05540 (GL2_11250) pilG 1295229..1295624 (-) 396 WP_020413651.1 twitching motility response regulator PilG Regulator
  GL2_RS05545 (GL2_11260) gshB 1295975..1296931 (+) 957 WP_143729662.1 glutathione synthase -
  GL2_RS05550 (GL2_11270) - 1297040..1297948 (+) 909 WP_143729663.1 energy transducer TonB -
  GL2_RS05555 (GL2_11280) - 1297983..1298567 (+) 585 WP_143729664.1 YqgE/AlgH family protein -
  GL2_RS05560 (GL2_11290) ruvX 1298630..1299052 (+) 423 WP_143729665.1 Holliday junction resolvase RuvX -
  GL2_RS05565 (GL2_11300) hemC 1299146..1300063 (+) 918 WP_143729666.1 hydroxymethylbilane synthase -

Sequence

Protein


Download         Length: 131 a.a.        Molecular weight: 14332.55 Da        Isoelectric Point: 7.2147

>NTDB_id=74212 GL2_RS05540 WP_020413651.1 1295229..1295624(-) (pilG) [Microbulbifer sp. GL-2]
MELNWESLTVMVIDDSKTIRRTAETLLQKAGCTVVTATDGFDALAKIADSRPDVIFVDIMMPRLDGYQTCALIKNNSEFR
STPVVMLSSKDGLFDKAKGRVVGCDQYLTKPFSKSELLGAISAHAKPHHAA

Nucleotide


Download         Length: 396 bp        

>NTDB_id=74212 GL2_RS05540 WP_020413651.1 1295229..1295624(-) (pilG) [Microbulbifer sp. GL-2]
ATGGAGCTTAACTGGGAAAGTCTGACTGTAATGGTGATTGATGACAGTAAGACAATTCGCCGCACTGCCGAGACGCTGCT
GCAAAAGGCGGGTTGCACCGTTGTCACTGCAACCGACGGTTTCGATGCATTGGCAAAAATTGCGGACTCCCGTCCGGATG
TCATTTTTGTCGATATTATGATGCCTCGCCTGGATGGCTACCAAACCTGCGCACTGATTAAAAATAACAGTGAATTTCGT
TCCACCCCTGTTGTAATGCTGTCGAGTAAGGATGGTTTGTTCGATAAGGCAAAAGGACGCGTGGTTGGCTGCGATCAATA
TTTGACCAAGCCTTTTAGTAAAAGCGAACTTTTGGGCGCAATATCCGCCCACGCTAAACCGCATCATGCGGCTTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

73.387

94.656

0.695
  vicR Streptococcus mutans UA159

41.026

89.313

0.366

Multiple sequence alignment