Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | VroAM7_RS14725 | Genome accession | NZ_AP019798 |
| Coordinates | 3129187..3129780 (-) | Length | 197 a.a. |
| NCBI ID | WP_143693017.1 | Uniprot ID | A0A510I9G5 |
| Organism | Vibrio rotiferianus strain AM7 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3124187..3134780
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VroAM7_RS14705 (VroAM7_27400) | aroB | 3125075..3126175 (-) | 1101 | WP_010443901.1 | 3-dehydroquinate synthase | - |
| VroAM7_RS14710 (VroAM7_27410) | aroK | 3126207..3126725 (-) | 519 | WP_010443904.1 | shikimate kinase AroK | - |
| VroAM7_RS14715 (VroAM7_27420) | pilQ | 3126914..3128647 (-) | 1734 | WP_143693016.1 | type IV pilus secretin PilQ | Machinery gene |
| VroAM7_RS14720 (VroAM7_27430) | pilP | 3128685..3129197 (-) | 513 | WP_088880304.1 | pilus assembly protein PilP | Machinery gene |
| VroAM7_RS14725 (VroAM7_27440) | pilO | 3129187..3129780 (-) | 594 | WP_143693017.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| VroAM7_RS14730 (VroAM7_27450) | pilN | 3129773..3130360 (-) | 588 | WP_143693018.1 | PilN domain-containing protein | Machinery gene |
| VroAM7_RS14735 (VroAM7_27460) | pilM | 3130344..3131360 (-) | 1017 | WP_138941723.1 | type IV pilus assembly protein PilM | Machinery gene |
| VroAM7_RS14740 (VroAM7_27470) | - | 3131501..3134068 (+) | 2568 | WP_088880300.1 | penicillin-binding protein 1A | - |
Sequence
Protein
Download Length: 197 a.a. Molecular weight: 23083.39 Da Isoelectric Point: 4.4691
>NTDB_id=74142 VroAM7_RS14725 WP_143693017.1 3129187..3129780(-) (pilO) [Vibrio rotiferianus strain AM7]
MSNWQDLELDEILDWPIVPQIFVIIVFAFLLQGMGYWFFLKSEGERLEQLVEEERRLKVMLKIKANKVAALPQLQSQLDE
LTTRYEYLLQQLPAQKELATMLASVNELGIDNNLTFARIDWGEKQPERFLYRLPLNIELTGSYHDIGRFSQAIATLPRII
TFQDVTWQRVSQESETLHFRVKASTFQFNPEETNDEG
MSNWQDLELDEILDWPIVPQIFVIIVFAFLLQGMGYWFFLKSEGERLEQLVEEERRLKVMLKIKANKVAALPQLQSQLDE
LTTRYEYLLQQLPAQKELATMLASVNELGIDNNLTFARIDWGEKQPERFLYRLPLNIELTGSYHDIGRFSQAIATLPRII
TFQDVTWQRVSQESETLHFRVKASTFQFNPEETNDEG
Nucleotide
Download Length: 594 bp
>NTDB_id=74142 VroAM7_RS14725 WP_143693017.1 3129187..3129780(-) (pilO) [Vibrio rotiferianus strain AM7]
ATGAGTAACTGGCAAGACTTAGAACTAGATGAAATTCTAGATTGGCCAATTGTTCCACAAATATTTGTCATTATTGTTTT
TGCCTTTTTATTGCAAGGCATGGGGTATTGGTTTTTCCTCAAGTCTGAAGGGGAGAGGCTTGAGCAATTGGTCGAAGAAG
AGCGTCGGCTTAAAGTTATGTTGAAGATCAAAGCCAATAAGGTTGCTGCATTACCTCAATTGCAATCCCAACTTGATGAG
TTAACGACACGTTACGAGTATTTGCTCCAACAACTCCCTGCTCAAAAGGAGCTCGCCACTATGCTGGCTTCTGTCAATGA
ACTTGGGATAGACAACAACCTTACTTTCGCACGGATTGATTGGGGGGAGAAACAACCTGAGCGTTTCTTATATCGTTTGC
CATTAAACATTGAGTTGACAGGGAGTTACCATGACATCGGTCGTTTTTCCCAAGCGATAGCGACGCTACCTCGAATCATT
ACCTTCCAAGATGTTACCTGGCAAAGAGTCAGTCAAGAAAGTGAGACCCTACATTTTAGAGTGAAAGCGAGCACATTCCA
ATTTAATCCAGAGGAAACAAATGATGAGGGCTAA
ATGAGTAACTGGCAAGACTTAGAACTAGATGAAATTCTAGATTGGCCAATTGTTCCACAAATATTTGTCATTATTGTTTT
TGCCTTTTTATTGCAAGGCATGGGGTATTGGTTTTTCCTCAAGTCTGAAGGGGAGAGGCTTGAGCAATTGGTCGAAGAAG
AGCGTCGGCTTAAAGTTATGTTGAAGATCAAAGCCAATAAGGTTGCTGCATTACCTCAATTGCAATCCCAACTTGATGAG
TTAACGACACGTTACGAGTATTTGCTCCAACAACTCCCTGCTCAAAAGGAGCTCGCCACTATGCTGGCTTCTGTCAATGA
ACTTGGGATAGACAACAACCTTACTTTCGCACGGATTGATTGGGGGGAGAAACAACCTGAGCGTTTCTTATATCGTTTGC
CATTAAACATTGAGTTGACAGGGAGTTACCATGACATCGGTCGTTTTTCCCAAGCGATAGCGACGCTACCTCGAATCATT
ACCTTCCAAGATGTTACCTGGCAAAGAGTCAGTCAAGAAAGTGAGACCCTACATTTTAGAGTGAAAGCGAGCACATTCCA
ATTTAATCCAGAGGAAACAAATGATGAGGGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Vibrio campbellii strain DS40M4 |
78.947 |
96.447 |
0.761 |
| pilO | Vibrio cholerae strain A1552 |
64.796 |
99.492 |
0.645 |