Detailed information NTG0074054

Bioinformatically predicted

Overview

• Name: pilQ
• Type: Machinery gene
• Locus tag: AA2Tth_RS07290
• Genome accession: NZ_AP019792
• Coordinates: 1370888..1373161 (+)
• Length: 757 a.a.
• NCBI ID: WP_143586074.1
• Uniprot ID: -
• Organism: Thermus thermophilus strain AA2-20
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1365888..1378161

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AA2Tth_RS07260 (TthAA220_14200)	-	1365999..1366490 (+)	492	WP_143586973.1	DUF5317 domain-containing protein	-
AA2Tth_RS07265 (TthAA220_14210)	-	1366545..1367549 (+)	1005	WP_143586066.1	homoisocitrate dehydrogenase	-
AA2Tth_RS07270 (TthAA220_14220)	pilM	1367684..1368817 (+)	1134	WP_143586068.1	type IV pilus assembly protein PilM	Machinery gene
AA2Tth_RS07275 (TthAA220_14230)	pilN	1368810..1369433 (+)	624	WP_011228637.1	competence protein	Machinery gene
AA2Tth_RS07280 (TthAA220_14240)	pilO	1369423..1370004 (+)	582	WP_143586070.1	type 4a pilus biogenesis protein PilO	Machinery gene
AA2Tth_RS07285 (TthAA220_14250)	pilW	1370001..1370891 (+)	891	WP_143586072.1	competence protein	Machinery gene
AA2Tth_RS07290 (TthAA220_14260)	pilQ	1370888..1373161 (+)	2274	WP_143586074.1	secretin N-terminal domain-containing protein	Machinery gene
AA2Tth_RS07295 (TthAA220_14270)	aroC	1373220..1374371 (+)	1152	WP_143586076.1	chorismate synthase	-
AA2Tth_RS07300 (TthAA220_14280)	-	1374396..1374950 (+)	555	WP_143586078.1	shikimate kinase	-
AA2Tth_RS07305 (TthAA220_14290)	-	1374928..1375974 (+)	1047	WP_143586080.1	3-dehydroquinate synthase family protein	-
AA2Tth_RS07310 (TthAA220_14300)	rsmF	1376020..1377390 (-)	1371	WP_143586082.1	16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF	-
AA2Tth_RS07315 (TthAA220_14310)	acpS	1377443..1377820 (+)	378	WP_143586084.1	holo-ACP synthase	-
AA2Tth_RS07320 (TthAA220_14320)	-	1377798..1378151 (-)	354	WP_143586086.1	DUF4870 domain-containing protein	-

Sequence

Protein

• Length: 757 a.a.
• Molecular weight: 82792.78 Da
• Isoelectric Point: 5.0770

>NTDB_id=74054 AA2Tth_RS07290 WP_143586074.1 1370888..1373161(+) (pilQ) [Thermus thermophilus strain AA2-20]
MKSAWIRAAVIALAGLGAFGLAGSFPEEPRFQAPVNLKVSESQVEAGQTLPLDVVLEALARSVGLQPLIYRAYDTSGDPA
KAQPPLPNIKLDFQGKPFREVWDLLFATYGNQYGLDYLFLPPDVVVVAPTQVITALVDAPSRTGAMERRPYIVGIPEIAY
KRTETDAQGQTRNVVNIEGAKAWVQNDLLPFLSREAAGLNVNWIVVEEGGRLKAVLSVLATPEQHARFSDILQRAGIDFR
PLPALAQPKPRVEKTYTLTYATFPDLLAFLQSRLPEAQISVVPTNPQRAIVLATEEDHARLSELLKTADVPKTVRRVYAL
QNLTFREAQERLKPLLEKDLKGARLESLPGNPKALLLEAPEAEHALFAEILKALDVPPQAPEAPQEATLRRLYPLRYANA
EQVAPFLAREVPGIVVQTVPGQPVLSVRGTEAQLREVESLLAQIDRPPEQGPPVFQRAYQLSNAKAVELAQVLQEALKAR
QAQNQGQQNQALPTREATVVADPRTNTLIVTGTQEDLALVEGLIPKLDQPVPQVNLRVRIQEVQSNLTRSLGLKWNSIAG
GNVAASILDSGLSLIFDSTRSLAALNIMATLDALQQQGLSRALRDVNQTVLNNQTARLQSGETFFIRRVVEGNVERVPFD
IGLIVEVTPQITADGQILLNIRAEVSGNVQRNPVDGDVDRFTKQVVTTTLRVKDGETVVLGGLTSQESNQSQQGVPLLMD
IPLIGELFKQRTNESTDKELLVVITADILKETASANP

Nucleotide

• Length: 2274 bp

>NTDB_id=74054 AA2Tth_RS07290 WP_143586074.1 1370888..1373161(+) (pilQ) [Thermus thermophilus strain AA2-20]
ATGAAGAGCGCGTGGATCCGTGCGGCCGTGATCGCCCTCGCAGGGCTAGGGGCTTTTGGCCTTGCGGGGAGCTTTCCCGA
GGAGCCCCGCTTCCAGGCCCCGGTGAACCTCAAGGTCTCGGAATCCCAGGTCGAAGCGGGCCAGACCCTGCCTCTGGACG
TGGTCCTCGAGGCCCTGGCGCGAAGCGTGGGGCTCCAGCCCCTCATCTACCGGGCCTACGATACAAGCGGGGACCCCGCC
AAGGCCCAGCCCCCCCTGCCCAACATCAAGCTGGACTTCCAGGGCAAGCCCTTCCGGGAGGTCTGGGACCTCCTCTTCGC
CACCTACGGCAACCAGTACGGCCTGGACTACCTCTTCCTGCCCCCCGACGTGGTGGTGGTGGCCCCCACCCAGGTGATCA
CCGCCCTGGTGGACGCCCCGAGCCGCACGGGGGCCATGGAGCGCAGGCCCTACATCGTGGGCATCCCCGAGATCGCCTAC
AAGCGCACGGAGACGGATGCCCAGGGCCAGACCCGCAACGTGGTCAACATTGAGGGCGCCAAGGCCTGGGTCCAGAACGA
CCTCCTCCCCTTCCTCTCCCGGGAGGCCGCGGGGCTCAACGTGAACTGGATCGTGGTGGAGGAGGGCGGGAGGCTCAAGG
CCGTCCTCTCCGTTCTCGCCACCCCCGAGCAACACGCCCGCTTCTCCGACATCCTGCAGCGGGCCGGGATTGACTTCCGC
CCCCTCCCCGCCCTGGCCCAGCCCAAGCCCCGGGTGGAGAAGACCTACACCCTCACCTACGCCACCTTCCCCGACCTCCT
CGCCTTCCTCCAGTCCCGCCTCCCCGAGGCCCAGATCAGCGTGGTCCCCACCAACCCCCAAAGGGCCATCGTCCTCGCCA
CCGAGGAGGACCACGCCCGCTTGAGCGAGCTTCTGAAGACGGCCGACGTCCCCAAGACCGTCCGCCGGGTCTACGCCCTG
CAGAACCTCACCTTCAGGGAGGCCCAGGAGCGCCTAAAGCCCCTCCTGGAGAAGGACCTCAAGGGGGCCCGCCTGGAGAG
CCTCCCCGGCAACCCCAAGGCCCTCCTCCTCGAGGCCCCCGAGGCGGAGCACGCCCTCTTCGCCGAGATCCTGAAGGCCC
TGGACGTCCCCCCCCAGGCCCCCGAAGCCCCCCAGGAGGCCACCTTGCGGCGCCTCTACCCCCTGCGCTACGCCAACGCC
GAGCAGGTGGCCCCCTTCCTCGCCCGGGAGGTGCCGGGGATCGTGGTCCAGACCGTCCCCGGCCAACCCGTCCTCTCGGT
GCGGGGCACGGAAGCGCAGCTTAGGGAGGTGGAAAGCCTCCTCGCCCAGATTGACCGCCCCCCGGAGCAGGGCCCTCCCG
TGTTCCAGCGGGCCTACCAGCTCTCCAACGCCAAGGCGGTGGAGCTCGCCCAGGTGCTCCAGGAGGCGCTCAAGGCCCGG
CAGGCCCAGAACCAGGGCCAGCAGAACCAGGCCCTCCCCACCCGGGAGGCCACGGTGGTGGCCGACCCCAGGACCAACAC
CCTCATCGTCACCGGCACCCAGGAGGACCTCGCCCTGGTGGAGGGCCTCATCCCCAAGCTGGACCAGCCCGTGCCCCAGG
TGAACCTCAGGGTGCGCATCCAGGAGGTCCAGTCCAACCTGACCCGTAGCCTCGGCCTCAAGTGGAACAGCATCGCCGGC
GGCAACGTGGCGGCCAGCATCCTGGACTCGGGCCTTTCCCTCATCTTTGACTCCACGCGAAGCCTCGCCGCCCTCAACAT
CATGGCCACCCTGGACGCCCTGCAGCAACAGGGCCTCTCCCGGGCCCTCCGGGACGTGAACCAGACCGTCCTCAACAACC
AGACCGCCCGCCTGCAGTCCGGCGAGACCTTCTTCATCCGGCGGGTGGTGGAGGGGAACGTGGAGCGGGTGCCCTTTGAC
ATCGGCCTCATCGTGGAGGTCACGCCCCAGATCACCGCCGACGGCCAGATCCTCCTCAACATCAGGGCCGAGGTCTCGGG
GAACGTCCAGCGCAACCCCGTGGACGGGGACGTGGACCGCTTCACCAAGCAGGTGGTGACCACCACCCTAAGGGTCAAAG
ACGGGGAGACCGTGGTCCTCGGGGGCCTCACCTCCCAGGAGTCCAACCAGAGCCAGCAGGGGGTGCCCCTCCTCATGGAC
ATCCCCCTGATCGGCGAGCTCTTCAAGCAGCGGACGAACGAGAGCACCGACAAGGAGCTTCTGGTGGTGATCACCGCCGA
CATCCTCAAGGAGACGGCCTCGGCGAACCCCTAA

Domains

Predicted by InterproScan.

• Bacterial type II/III secretion system short domain (Secretin_N) (457-533)

• Bacterial type II/III secretion system short domain (Secretin_N) (391-450)

• Bacterial type II and III secretion system protein (Secretin) (593-750)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilQ	Thermus thermophilus HB27	97.094	100	0.971