Detailed information NTG0736274

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: N9E61_RS17715
• Genome accession: NZ_CP106872
• Coordinates: 3581470..3582615 (+)
• Length: 381 a.a.
• NCBI ID: WP_074534220.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain STJ-6
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3576470..3587615

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N9E61_RS17695 (N9E61_17695)	-	3577367..3577795 (-)	429	WP_032869448.1	DUF1934 domain-containing protein	-
N9E61_RS17700 (N9E61_17700)	-	3577949..3578461 (+)	513	Protein_3432	bacteriocin biosynthesis protein AlbG	-
N9E61_RS17705 (N9E61_17705)	-	3578468..3579844 (-)	1377	WP_032875890.1	YncE family protein	-
N9E61_RS17710 (N9E61_17710)	-	3579884..3581239 (-)	1356	WP_032875887.1	YncE family protein	-
N9E61_RS17715 (N9E61_17715)	rapF	3581470..3582615 (+)	1146	WP_074534220.1	Rap family tetratricopeptide repeat protein	Regulator
N9E61_RS17720 (N9E61_17720)	-	3582599..3582718 (+)	120	WP_017418707.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
N9E61_RS17725 (N9E61_17725)	speB	3582841..3583713 (-)	873	WP_032875884.1	agmatinase	-
N9E61_RS17730 (N9E61_17730)	speE	3583772..3584602 (-)	831	WP_003151052.1	spermidine synthase	-
N9E61_RS17735 (N9E61_17735)	-	3584802..3586874 (+)	2073	WP_032875881.1	transglycosylase domain-containing protein	-
N9E61_RS17740 (N9E61_17740)	-	3586899..3587332 (-)	434	Protein_3440	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45737.21 Da
• Isoelectric Point: 5.0614

>NTDB_id=736274 N9E61_RS17715 WP_074534220.1 3581470..3582615(+) (rapF) [Bacillus velezensis strain STJ-6]
MASVLSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEDDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSDLLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVKDHIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYLIYKDAEKYNIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTMAELEQQPQLMGRTLFNIALCHNNQNNKVE
AIPHLKEAIAVFEKAQMSHSLPQPYFLLTQIYFKLKNIDNAYDYHKKGISICKEIDDIIYEEKFKFLEYLYMPDPRDTLI
NDCLHFLENKLMYADIEELALDVAKYYYTQEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=736274 N9E61_RS17715 WP_074534220.1 3581470..3582615(+) (rapF) [Bacillus velezensis strain STJ-6]
GTGGCGAGTGTTTTATCATCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAACTTGCAGGTCTGGAAGATGATCAGGATCTTCATCTATACTATT
CTCTCATGGAATTCCGTCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGATCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGTCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAATATCTTTCAGCGATTCAGTTTTTTAAGAAAGCTGAAAGCAAACTGACGTACG
TTAAAGATCATATAGAAAAAGCTGAATTTTACTTTAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTATCG
ATGGATTATGCGCGGCAGGCTTATTTAATTTATAAAGATGCAGAAAAATATAATATTAGATTAACCCAGTGCCATTCTTT
ATTTGGGGCTAATTATCTTGATGTAAAGCAATACGATCACGCGATTTCCCACTTTCAAAAGGCATATACGATGGCTGAAT
TGGAGCAGCAGCCGCAATTAATGGGGAGGACACTTTTTAACATCGCTTTATGCCATAATAATCAAAACAATAAAGTCGAG
GCTATTCCCCATTTAAAAGAAGCCATAGCTGTTTTTGAAAAAGCTCAAATGAGTCATTCACTTCCGCAGCCCTACTTCTT
ACTTACACAGATTTATTTTAAGTTAAAAAATATAGATAACGCGTACGATTATCATAAAAAAGGTATCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAAAAATTTAAATTTTTAGAATACTTGTATATGCCGGATCCAAGAGATACATTAATA
AACGATTGTCTGCATTTTCTTGAAAATAAATTGATGTATGCTGATATTGAGGAATTAGCCCTTGATGTAGCTAAATATTA
TTACACACAAGAAGAATATAAAAAAGCTTCTGTCTACTTTTTAAAGGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_12) (188-254)

• Tetratricopeptide repeat (TPR_8) (265-293)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	70.079	100	0.701
rapC	Bacillus subtilis subsp. subtilis str. 168	54.211	99.738	0.541