Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   P5628_RS00070 Genome accession   NZ_CP120577
Coordinates   11461..12288 (+) Length   275 a.a.
NCBI ID   WP_003226767.1    Uniprot ID   A0ABU0VCW3
Organism   Bacillus subtilis strain PRO53     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 6461..17288
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5628_RS00045 (P5628_00045) yaaO 7524..8966 (+) 1443 WP_277709194.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
  P5628_RS00050 (P5628_00050) tmk 8963..9601 (+) 639 WP_069322312.1 dTMP kinase -
  P5628_RS00055 (P5628_00055) darA 9675..10004 (+) 330 WP_003242755.1 cyclic di-AMP receptor DarA -
  P5628_RS00060 (P5628_00060) yaaR 10017..10457 (+) 441 WP_009966249.1 YaaR family protein -
  P5628_RS00065 (P5628_00065) holB 10469..11458 (+) 990 WP_003226770.1 DNA polymerase III subunit delta' -
  P5628_RS00070 (P5628_00070) yaaT 11461..12288 (+) 828 WP_003226767.1 competence/sporulation regulator complex protein RicT Regulator
  P5628_RS00075 (P5628_00075) yabA 12303..12662 (+) 360 WP_003218308.1 replication initiation-control protein YabA -
  P5628_RS00080 (P5628_00080) trmNF 12721..13464 (+) 744 WP_277709195.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  P5628_RS00085 (P5628_00085) yazA 13451..13750 (+) 300 WP_069837179.1 GIY-YIG nuclease family protein -
  P5628_RS00090 (P5628_00090) rsmI 13725..14603 (+) 879 WP_277709196.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  P5628_RS00095 (P5628_00095) abrB 14652..14942 (-) 291 WP_003226760.1 transition state genes transcriptional regulator AbrB Regulator

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31233.09 Da        Isoelectric Point: 4.7700

>NTDB_id=732618 P5628_RS00070 WP_003226767.1 11461..12288(+) (yaaT) [Bacillus subtilis strain PRO53]
MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFDICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTANGPAKVVGLNI
LERVLQVELINREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=732618 P5628_RS00070 WP_003226767.1 11461..12288(+) (yaaT) [Bacillus subtilis strain PRO53]
TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTATTTTGATCCGAATGGATTTCATATAGAACA
TGACAGCTGCGTAATTGTAGAAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTAATTGCAAATAAACAGGTGGATGAGC
ATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTTGCTGACGAACGCGATCTTCTCATTGTAGAAGAAAATAAACAG
GAAGCACTATCAGCATTTGATATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATGAAGCTGGTCGATGTTGAATT
CACGTTTGATCGCAATAAAGTCATTTTTTACTTCACTGCTGACGGCCGAGTCGACTTTAGAGAGCTTGTAAAGGATTTGG
CTTCTATCTTTAAGACAAGAATTGAGCTGCGCCAAATCGGAGTGAGGGATGAGGCAAAAATGCTCGGAGGAATCGGTCCT
TGCGGAAGAATGCTTTGCTGTTCAACGTTTCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGGATCAGAACTT
GTCTTTAAATCCTACGAAGATTTCGGGTCTTTGCGGACGATTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGA
CGGCAAAAGAACAGCTTCCGGATATAGGAGAAATGATAACGACAGCAAACGGTCCCGCGAAGGTCGTCGGACTAAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGATAAACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

99.636

100

0.996