Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilG   Type   Regulator
Locus tag   KJS76_RS02070 Genome accession   NZ_AP024513
Coordinates   448427..448834 (+) Length   135 a.a.
NCBI ID   WP_003084583.1    Uniprot ID   A0A0H2ZL28
Organism   Pseudomonas aeruginosa isolate Pa12     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 443427..453834
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJS76_RS02040 (RVB2_04090) - 443475..444479 (-) 1005 WP_003084569.1 aspartate carbamoyltransferase catalytic subunit -
  KJS76_RS02045 (RVB2_04100) pyrR 444503..445015 (-) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  KJS76_RS02050 (RVB2_04110) ruvX 445127..445561 (-) 435 WP_003084575.1 Holliday junction resolvase RuvX -
  KJS76_RS02055 (RVB2_04120) - 445561..446130 (-) 570 WP_003100947.1 YqgE/AlgH family protein -
  KJS76_RS02060 (RVB2_04130) - 446179..447072 (-) 894 WP_003162015.1 energy transducer TonB -
  KJS76_RS02065 (RVB2_04140) gshB 447219..448172 (-) 954 WP_003100943.1 glutathione synthase -
  KJS76_RS02070 (RVB2_04150) pilG 448427..448834 (+) 408 WP_003084583.1 twitching motility response regulator PilG Regulator
  KJS76_RS02075 (RVB2_04160) pilH 448881..449246 (+) 366 WP_003084587.1 twitching motility response regulator PilH Machinery gene
  KJS76_RS02080 (RVB2_04170) - 449297..449833 (+) 537 WP_003084590.1 chemotaxis protein CheW -
  KJS76_RS02085 (RVB2_04180) pilJ 449918..451966 (+) 2049 WP_003084592.1 chemotaxis chemoreceptor PilJ -
  KJS76_RS02090 (RVB2_04190) pilK 452027..452902 (+) 876 WP_003100938.1 type 4 fimbrial methyltransferase PilK -

Sequence


Protein


Download         Length: 135 a.a.        Molecular weight: 14718.11 Da        Isoelectric Point: 7.1340

>NTDB_id=72775 KJS76_RS02070 WP_003084583.1 448427..448834(+) (pilG) [Pseudomonas aeruginosa isolate Pa12]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=72775 KJS76_RS02070 WP_003084583.1 448427..448834(+) (pilG) [Pseudomonas aeruginosa isolate Pa12]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0H2ZL28

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704

  vicR Streptococcus mutans UA159

44.444

86.667

0.385


Multiple sequence alignment