Detailed information    

insolico Bioinformatically predicted

Overview

Name   rexB   Type   Machinery gene
Locus tag   PUW70_RS03385 Genome accession   NZ_CP118029
Coordinates   661191..664463 (+) Length   1090 a.a.
NCBI ID   WP_024051908.1    Uniprot ID   A0A412PPI0
Organism   Streptococcus anginosus strain VSI68     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 656191..669463
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PUW70_RS03355 (PUW70_03355) - 656487..657353 (+) 867 WP_070241604.1 ABC transporter permease -
  PUW70_RS03360 (PUW70_03360) - 657350..658108 (+) 759 WP_101750296.1 ABC transporter ATP-binding protein -
  PUW70_RS03365 (PUW70_03365) - 658124..658466 (-) 343 Protein_624 hypothetical protein -
  PUW70_RS03370 (PUW70_03370) - 658554..658766 (+) 213 WP_003025304.1 YdbC family protein -
  PUW70_RS03375 (PUW70_03375) - 658967..659860 (+) 894 WP_024051910.1 ABC transporter ATP-binding protein -
  PUW70_RS03380 (PUW70_03380) - 659857..661071 (+) 1215 WP_101750295.1 ABC transporter permease -
  PUW70_RS03385 (PUW70_03385) rexB 661191..664463 (+) 3273 WP_024051908.1 ATP-dependent nuclease subunit B Machinery gene
  PUW70_RS03390 (PUW70_03390) rexA 664460..668140 (+) 3681 WP_101750307.1 helicase-exonuclease AddAB subunit AddA Machinery gene

Sequence

Protein


Download         Length: 1090 a.a.        Molecular weight: 125380.24 Da        Isoelectric Point: 5.2294

>NTDB_id=720361 PUW70_RS03385 WP_024051908.1 661191..664463(+) (rexB) [Streptococcus anginosus strain VSI68]
MKLLYTDIRNPLTKILVKEAERLAQAGKRVFYIAPNSLSFEKERAVLSLLENHASFAITVTRFAQMARYFVLNDVQQGRP
LDDIGLGMLFYKVLSEMEEHDLQVYGGIRTDVQFIQQLVELFHELQAAQMTFADLDYLDEDEKKADLIKILQLVTHQLNQ
SEFISESNIMVFANHITAGDVDKELQGLALVIDGFTRFSAEEAYLIELLHSKGVEIIIGVYASEKAYRATFREGNLYQAS
VDFLRHLANEYEVKPEYRPATQPDDAFGNISKLLESRYDFSDVELELTEQDRSHVQIWSTVNQKEELEYVAKSIRQRVHD
GARYKDIRLLLGDVEAYRLQLKTIFDQYQIPFYLGRSESMAHHPLVQFIEALVRLKRYNFRTEDLLNLVKTGLYGHLKQE
ELDLFEQYIRFADVKGISKFSKDFTHNQHQKFDLIHINQLRKKIVTPLLEFLKSRSQTATGLLQKFHQFLTTIAFSQNFA
GLVDSTNPQDQERQEEVWKAFCHVLEQFASVFSASKVKLDDFLTLVQSGMLLSNYRTIPATVDVVTVQSYDLIEPLSSPF
VYAVGLTQDYFPKNSQNKSLLSDEDRLRLNEATDAHSELLIAAQENLQKNRFVALSLLNAATERLVLSTPQIVNEIENNI
SPYLLELHEQPIGLPIEVKRLQATSDDIGTYRALLARVIELNQGDIDRERSLTEKEQTFWSVAVRVLRKKLESEGISIPN
VTSSLETETLSTQTLQALYPPHQAFLLSTSALTEFYRNQYAYFLKYVLALQEEMTIHPDARSHGNFLHRVFEKVMQEQSS
EPFDNRLEKAIQETSQEAEFKTLYTENAEALFAHEVLLDTARATGRVLERNDLVETIQEEAVFGQEETNVLILSDGRNLQ
IRGKVDRIDRLRIDGSLGVVDYKSSDTNFDFQKFFNGLNSQLPTYLAALKQESWMNEEEHAFGAMYLQMTNPLVPLAKTK
SQGDAVKEAMKNLEYKGLFLSEQARQLNALYDKKKVNLLSQEELETLLAYNALLYRRAAEQILAGHFYINPYTENGRSIA
PFVEQYKSITGFEANFHLSSTRHLVKLDSHPTGEKKRQAWIEKMKEELEK

Nucleotide


Download         Length: 3273 bp        

>NTDB_id=720361 PUW70_RS03385 WP_024051908.1 661191..664463(+) (rexB) [Streptococcus anginosus strain VSI68]
ATGAAATTACTTTATACTGATATTCGCAATCCCTTAACGAAGATTTTGGTGAAAGAAGCAGAGCGCTTGGCACAAGCAGG
CAAGCGCGTGTTTTATATTGCCCCCAACTCTCTTTCATTTGAAAAAGAGAGGGCTGTTTTGAGTCTTTTAGAAAACCACG
CTTCGTTTGCTATTACAGTGACACGTTTTGCGCAGATGGCGCGTTATTTTGTCCTCAATGATGTGCAGCAAGGCAGACCA
TTAGACGATATTGGTTTGGGAATGCTCTTTTATAAGGTATTATCTGAAATGGAAGAGCATGATTTGCAGGTGTACGGAGG
CATTCGGACGGATGTGCAGTTTATTCAGCAATTGGTTGAGCTTTTTCATGAATTGCAAGCTGCTCAAATGACCTTTGCGG
ATTTAGACTATCTAGATGAGGATGAGAAAAAAGCAGATTTGATCAAGATTTTACAGCTAGTGACGCATCAGCTAAATCAG
AGTGAATTTATTTCTGAGTCAAATATTATGGTCTTTGCTAATCATATTACAGCAGGTGATGTAGATAAAGAATTGCAAGG
ATTGGCTTTGGTCATTGACGGTTTTACACGTTTTTCAGCTGAAGAAGCTTATTTGATCGAGCTTTTGCATAGCAAGGGTG
TGGAAATCATTATTGGTGTTTATGCCAGTGAGAAGGCATACCGTGCAACTTTTCGAGAGGGCAATCTCTATCAGGCTAGC
GTGGATTTCTTGCGCCATTTGGCAAATGAGTATGAAGTGAAACCTGAATATAGACCTGCAACGCAGCCAGATGATGCTTT
TGGGAACATTTCAAAACTGCTAGAAAGCCGTTATGATTTCTCAGATGTTGAGTTGGAATTGACGGAGCAAGACCGCTCGC
ATGTACAGATTTGGTCGACTGTCAATCAAAAAGAAGAACTGGAATATGTGGCGAAAAGCATTCGCCAGCGAGTTCATGAT
GGTGCTCGCTACAAAGATATTCGCTTACTTTTGGGAGATGTGGAAGCCTATCGTTTGCAGTTAAAGACGATTTTTGATCA
GTATCAGATTCCTTTTTATTTGGGGCGAAGCGAGTCCATGGCACATCACCCTTTGGTGCAGTTTATTGAAGCGTTAGTGC
GTTTAAAACGCTATAATTTTCGGACAGAAGATTTGCTTAATCTTGTAAAAACAGGTCTTTATGGTCATTTAAAGCAAGAA
GAACTAGACTTATTTGAGCAATATATTCGCTTTGCAGATGTAAAAGGGATTAGTAAATTTTCTAAAGATTTTACTCATAA
TCAGCATCAAAAATTTGACCTGATTCACATCAATCAATTAAGAAAAAAAATAGTCACTCCGCTTTTGGAGTTTTTAAAAT
CTCGCAGTCAAACAGCGACAGGTTTGCTTCAAAAATTTCATCAATTTTTAACAACAATTGCTTTTTCTCAGAATTTTGCT
GGTTTGGTAGATTCTACGAATCCGCAAGATCAAGAACGGCAAGAAGAAGTTTGGAAAGCTTTTTGTCATGTTTTGGAACA
ATTTGCCAGTGTCTTTTCAGCCAGCAAGGTCAAGCTAGATGATTTTCTGACTCTAGTGCAGTCAGGAATGCTGTTATCCA
ACTATCGAACTATTCCAGCAACGGTGGACGTTGTGACCGTTCAATCTTATGATTTGATTGAGCCCTTGTCAAGTCCTTTT
GTCTATGCTGTTGGTTTGACCCAAGACTATTTTCCAAAAAATTCCCAAAATAAGAGCCTTTTGTCAGACGAAGACCGACT
ACGATTAAATGAAGCGACTGATGCGCATTCGGAATTGCTGATTGCTGCTCAGGAAAATCTCCAGAAAAATCGTTTTGTTG
CCTTGTCGCTTTTGAATGCTGCAACAGAGAGGCTTGTCCTCTCCACCCCTCAGATTGTCAATGAAATAGAGAACAACATT
TCTCCATATTTGTTAGAATTGCATGAACAACCAATTGGGCTGCCGATTGAAGTGAAGCGTTTGCAGGCAACGAGTGATGA
TATTGGAACTTATCGAGCTCTGCTGGCAAGGGTTATTGAGTTGAATCAAGGGGATATTGATCGGGAGCGTTCTTTGACGG
AGAAAGAGCAGACTTTTTGGTCAGTAGCTGTGCGGGTTCTGCGCAAAAAATTGGAAAGCGAAGGTATTTCGATTCCTAAT
GTAACGTCAAGCCTTGAAACAGAAACCTTGTCAACGCAGACATTGCAAGCTCTTTATCCGCCTCATCAGGCATTTCTACT
GTCGACTTCAGCTTTGACAGAATTCTACCGCAATCAATATGCTTATTTTTTGAAGTATGTCTTGGCTTTGCAGGAAGAAA
TGACGATTCACCCAGATGCGCGCAGCCATGGAAATTTTCTGCATCGTGTGTTTGAAAAAGTCATGCAAGAGCAGTCTAGT
GAGCCATTTGATAATCGCCTAGAAAAAGCCATTCAAGAAACCAGTCAGGAGGCAGAATTTAAAACTCTTTATACGGAAAA
TGCAGAAGCCTTGTTTGCTCACGAAGTCTTGCTGGACACAGCGCGTGCGACAGGGCGTGTTCTAGAAAGAAATGATTTAG
TAGAAACCATTCAAGAAGAAGCTGTTTTCGGTCAAGAAGAAACAAATGTTCTAATCTTGTCAGACGGACGCAACCTTCAA
ATTCGAGGGAAAGTTGACCGGATTGACCGTTTGAGGATAGATGGCAGTCTAGGCGTTGTTGACTATAAATCAAGCGATAC
GAATTTTGATTTTCAGAAATTTTTCAATGGCTTAAATTCTCAATTACCTACCTATCTAGCAGCTTTGAAACAAGAGTCGT
GGATGAATGAAGAAGAGCATGCTTTTGGCGCCATGTATTTGCAGATGACCAATCCACTTGTGCCTTTAGCCAAGACGAAA
TCGCAAGGCGACGCTGTCAAAGAAGCAATGAAGAACCTAGAATATAAAGGTCTGTTCTTGTCTGAGCAGGCTCGTCAGCT
GAATGCTTTGTACGATAAAAAGAAAGTGAATCTGTTGAGTCAAGAGGAGTTGGAGACATTGTTGGCTTATAATGCACTCT
TGTATCGCCGTGCTGCTGAGCAGATCTTGGCAGGGCATTTTTACATCAATCCTTATACGGAAAATGGCAGAAGTATTGCA
CCTTTTGTGGAGCAGTACAAGTCCATTACGGGATTTGAAGCTAACTTTCACCTCTCTAGCACCCGCCATTTGGTTAAGTT
AGATAGCCACCCGACAGGTGAAAAGAAGCGTCAAGCATGGATAGAAAAGATGAAGGAGGAGTTAGAAAAATGA

Domains

Predicted by InterProScan.

PD-(D/E)XK nuclease superfamily (PDDEXK_1)

(747-1033)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A412PPI0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rexB Streptococcus pneumoniae R6

55.818

100

0.563