Detailed information NTG0719701

Bioinformatically predicted

Overview

• Name: luxO
• Type: Regulator
• Locus tag: PT284_RS20470
• Genome accession: NZ_CP117959
• Coordinates: 4056736..4058145 (-)
• Length: 469 a.a.
• NCBI ID: WP_078046183.1
• Uniprot ID: -
• Organism: Escherichia coli strain B-2207
• Function: promote HapR production (predicted from homology) Competence regulation

Genomic Context

Location: 4051736..4063145

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PT284_RS20445	yihA	4053000..4053632 (-)	633	WP_000183349.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-
PT284_RS20450	-	4053929..4054095 (+)	167	Protein_3857	hypothetical protein	-
PT284_RS20455	yihI	4054214..4054723 (+)	510	WP_001295266.1	Der GTPase-activating protein YihI	-
PT284_RS20460	hemN	4054912..4056285 (+)	1374	WP_000116090.1	oxygen-independent coproporphyrinogen III oxidase	-
PT284_RS20465	yshB	4056514..4056624 (-)	111	WP_000893994.1	YshB family small membrane protein	-
PT284_RS20470	luxO	4056736..4058145 (-)	1410	WP_078046183.1	nitrogen regulation protein NR(I)	Regulator
PT284_RS20475	glnL	4058157..4059206 (-)	1050	WP_000190577.1	nitrogen regulation protein NR(II)	-
PT284_RS20480	glnA	4059492..4060901 (-)	1410	WP_001271717.1	glutamate--ammonia ligase	-
PT284_RS20485	typA	4061274..4063097 (+)	1824	WP_000570668.1	ribosome-dependent GTPase TypA	-

Sequence

Protein

• Length: 469 a.a.
• Molecular weight: 52226.69 Da
• Isoelectric Point: 6.4561

>NTDB_id=719701 PT284_RS20470 WP_078046183.1 4056736..4058145(-) (luxO) [Escherichia coli strain B-2207]
MQRGIVWVVDDDSSIRWVLERALAGAGLTCTTFENGAEVLEALASKTPDVLLSDIRMPGMDGLALLKQIKQRHPMLPVII
MTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAISHYQEQQQPRNVQLNGPTTDIIGEAPAMQDVFRIIGRLSRS
SISALINGESGTGKELVAHALHRHSPRAKAPFIALNMAAIPKDLIESELFGHEKGAFTGANTIRQGRFEQADGGTLFLDE
IGDMPLDVQTRLLRVLADGQFYRVGGYAPVKVDVRIIAATHQNLEQRVQEGKFREDLFHRLNVIRVHLPPLRERREDIPR
LARHFLQVAARELGVEAKLLHPETEAALTRLAWPGNVRQLENTCRWLTVMAAGQEVLIQDLPGELFESTVAESTSQMQPD
SWATLLAQWADRALRSGHQNLLSEAQPELERTLLTTALRHTQGHKQEAARLLGWGRNTLTRKLKELGME

Nucleotide

• Length: 1410 bp

>NTDB_id=719701 PT284_RS20470 WP_078046183.1 4056736..4058145(-) (luxO) [Escherichia coli strain B-2207]
ATGCAACGAGGGATAGTCTGGGTAGTCGATGACGATAGTTCCATCCGTTGGGTGCTTGAACGTGCGCTCGCTGGGGCAGG
TTTAACCTGTACGACGTTTGAGAACGGCGCAGAAGTGCTGGAGGCGCTGGCGAGCAAAACGCCGGATGTGCTGCTTTCAG
ATATCCGTATGCCGGGAATGGACGGGCTGGCGCTGCTCAAGCAGATTAAACAGCGCCATCCAATGCTTCCGGTCATCATT
ATGACCGCACATTCCGATCTGGATGCTGCCGTCAGCGCCTATCAACAAGGGGCGTTTGATTATCTGCCCAAACCGTTTGA
TATCGACGAAGCAGTGGCGCTGGTTGAGCGCGCTATCAGTCATTACCAGGAACAGCAGCAGCCGCGTAATGTTCAGCTTA
ACGGCCCAACGACCGATATCATCGGCGAAGCGCCAGCCATGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCT
TCTATTAGCGCGCTGATTAACGGCGAATCCGGCACCGGTAAAGAACTGGTCGCTCATGCCCTGCATCGCCACAGTCCGCG
CGCCAAAGCGCCGTTTATCGCGCTGAATATGGCAGCTATCCCAAAAGATTTGATCGAATCAGAACTGTTTGGCCACGAGA
AAGGCGCGTTTACTGGCGCGAATACCATTCGTCAGGGGCGTTTTGAACAGGCCGATGGCGGTACATTATTCCTCGACGAA
ATTGGTGATATGCCGCTGGATGTGCAGACGCGTTTGCTGCGCGTGCTGGCAGACGGTCAGTTTTACCGCGTTGGCGGCTA
TGCGCCGGTGAAAGTGGATGTGCGGATTATCGCTGCCACTCACCAGAATCTCGAACAGCGAGTGCAGGAAGGTAAGTTCC
GTGAGGATCTGTTCCACCGCCTGAACGTTATCCGCGTTCATCTGCCGCCGCTGCGCGAACGTCGGGAAGATATTCCCCGT
CTGGCGCGCCATTTTTTACAGGTTGCCGCGCGCGAACTGGGCGTAGAAGCGAAGTTACTGCATCCGGAAACCGAAGCTGC
TCTGACGCGTCTGGCGTGGCCAGGCAACGTGCGCCAGCTGGAAAACACCTGCCGCTGGCTAACGGTGATGGCCGCCGGGC
AGGAAGTGTTGATTCAGGATTTGCCCGGCGAACTGTTTGAATCAACGGTTGCGGAGAGTACTTCGCAAATGCAACCGGAC
AGCTGGGCGACGCTTCTTGCGCAGTGGGCAGACAGAGCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGCC
AGAGCTGGAGCGGACGTTACTGACGACCGCGTTGCGACATACGCAGGGGCATAAACAGGAAGCGGCGCGGCTACTCGGCT
GGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGATGGAGTGA

Domains

Predicted by InterProScan.

• Response regulator receiver domain (Response_reg) (6-115)

• Bacterial regulatory protein, Fis family (HTH_8) (427-466)

• Sigma-54 interaction domain (Sigma54_activat) (140-306)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxO	Vibrio cholerae strain A1552	39.871	98.934	0.394
pilR	Pseudomonas aeruginosa PAK	38.854	100	0.39