Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   PSQ21_RS13920 Genome accession   NZ_CP117709
Coordinates   3239015..3240139 (+) Length   374 a.a.
NCBI ID   WP_007456913.1    Uniprot ID   A0ABZ1ZMY3
Organism   Streptomyces sp. MMBL 11-1     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 3234015..3245139
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PSQ21_RS13905 - 3234510..3235367 (+) 858 WP_274030820.1 hypothetical protein -
  PSQ21_RS13910 - 3235439..3237313 (-) 1875 WP_274030821.1 hypothetical protein -
  PSQ21_RS13915 radA/sms 3237523..3238935 (+) 1413 WP_274030822.1 DNA repair protein RadA Machinery gene
  PSQ21_RS13920 disA 3239015..3240139 (+) 1125 WP_007456913.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  PSQ21_RS13925 - 3240435..3241175 (-) 741 WP_274035761.1 hypothetical protein -
  PSQ21_RS13930 - 3241488..3242393 (+) 906 WP_032793704.1 A/G-specific adenine glycosylase -
  PSQ21_RS13935 - 3242640..3243311 (+) 672 WP_274030823.1 SigE family RNA polymerase sigma factor -
  PSQ21_RS13940 - 3243488..3244165 (+) 678 WP_274030824.1 hypothetical protein -
  PSQ21_RS13945 cseB 3244290..3245003 (+) 714 WP_274030825.1 two-component system response regulator CseB -

Sequence

Protein


Download         Length: 374 a.a.        Molecular weight: 40382.32 Da        Isoelectric Point: 5.0230

>NTDB_id=718530 PSQ21_RS13920 WP_007456913.1 3239015..3240139(+) (disA) [Streptomyces sp. MMBL 11-1]
MAANDRATTPGKSGQGTGNEALMRASLSAVAPGMALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDMTKILRAGVQLVPDASIHTEETGTRHRTADRVSKACGFPVVSVSQSMRLIALYVDGERRVLEESSA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELDALSHTELLELAVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=718530 PSQ21_RS13920 WP_007456913.1 3239015..3240139(+) (disA) [Streptomyces sp. MMBL 11-1]
GTGGCAGCCAACGACCGGGCGACAACGCCCGGAAAGTCCGGCCAAGGCACCGGTAACGAGGCGCTGATGCGCGCCTCGTT
GAGCGCGGTCGCGCCCGGAATGGCCCTGCGGGACGGCCTGGAGCGCATTCTCCGCGGCAATACCGGTGGGCTGATCGTGC
TGGGCATGGACAAGACCGTCGAGTCCATGTGCACCGGCGGATTCGTCCTGGACGTGGAGTTCACGGCGACGCGCCTGCGC
GAGCTGTGCAAGCTCGACGGGGCGCTGATCCTCGACAAGGACATGACCAAGATCCTGAGGGCCGGTGTGCAGCTGGTCCC
CGACGCCTCGATCCACACGGAGGAGACGGGCACCCGGCACCGTACGGCGGACCGGGTCTCCAAGGCGTGCGGCTTCCCCG
TCGTCTCGGTCTCCCAGTCGATGCGTCTGATCGCGCTGTACGTGGACGGGGAGCGCCGGGTCCTGGAGGAGTCCTCCGCG
ATCCTGTCCCGGGCCAATCAGGCGCTCGCCACGCTGGAGCGGTACAAACTGCGCCTCGACGAGGTGGCGGGCACGCTGTC
CGCGCTGGAGATCGAGGACCTGGTCACCGTCCGGGACGTGACGGCGGTGGCGCAGCGGCTGGAGATGGTGCGGCGGATCG
CCACGGAGATCGCGGAGTACGTGGTCGAGCTCGGCACCGACGGACGGCTGCTCTCGCTCCAGCTGGACGAGCTGATCGCC
GGGGTGGAGCCGGAGCGGGAGCTGGTCGTCCGGGACTATGTCCCCGAGCCGACGGCGAAGCGGTCGCGCACGGTGGCCGA
GGCGCTGACCGAGCTGGACGCGCTGAGCCACACGGAGCTGCTGGAACTGGCGGTGGTGGCGCGGGCGCTGGGCTACAGCG
GTTCGCCCGAGACGCTGGACTCGGCGGTGTCGCCGCGGGGCTTCCGGCTGCTGGCGAAGGTGCCGCGGCTGCCGGGGGCG
ATCATCGAGCGGCTGGTGGAGCACTTCGGCGGTCTGCAGAAGCTGCTGGCGGCGAGCGTGGACGACCTCCAGACGGTGGA
CGGCGTCGGCGAGGCGCGGGCGCGCAGCGTGCGGGAGGGGCTTTCGCGGCTGGCGGAGTCGTCGATCCTGGAGCGGTACG
TCTGA

Domains

Predicted by InterProScan.

Helix-hairpin-helix motif (HHH_2)

(324-359)

DisA bacterial checkpoint controller linker region (DisA-linker)

(155-297)

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(38-151)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436