Detailed information NTG0718033

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: IL310_RS08135
• Genome accession: NZ_CP117409
• Coordinates: 1203559..1204614 (+)
• Length: 351 a.a.
• NCBI ID: WP_201248850.1
• Uniprot ID: -
• Organism: Lactococcus lactis strain LB7
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1198559..1209614

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IL310_RS08100 (IL310_08105)	-	1198617..1199459 (-)	843	WP_058203084.1	aldo/keto reductase	-
IL310_RS08105 (IL310_08110)	-	1199953..1200192 (+)	240	WP_124137463.1	GlsB/YeaQ/YmgE family stress response membrane protein	-
IL310_RS08110 (IL310_08115)	amaP	1200222..1200782 (+)	561	WP_047205608.1	alkaline shock response membrane anchor protein AmaP	-
IL310_RS08115 (IL310_08120)	-	1200792..1200980 (+)	189	WP_011835142.1	DUF2273 domain-containing protein	-
IL310_RS08120 (IL310_08125)	-	1201001..1201552 (+)	552	WP_195228714.1	Asp23/Gls24 family envelope stress response protein	-
IL310_RS08125 (IL310_08130)	-	1201708..1201890 (+)	183	WP_274448947.1	CorA family divalent cation transporter	-
IL310_RS08130 (IL310_08135)	-	1201930..1202859 (+)	930	WP_201248851.1	N(5)-(carboxyethyl)ornithine synthase	-
IL310_RS08135 (IL310_08140)	xerS	1203559..1204614 (+)	1056	WP_201248850.1	tyrosine recombinase XerS	Machinery gene
IL310_RS08140 (IL310_08145)	-	1204698..1204985 (+)	288	WP_015426413.1	hypothetical protein	-
IL310_RS08145 (IL310_08150)	-	1205834..1206625 (+)	792	WP_201179654.1	hypothetical protein	-
IL310_RS08155 (IL310_08160)	-	1206877..1207305 (+)	429	WP_201248849.1	hypothetical protein	-
IL310_RS08160 (IL310_08165)	-	1207298..1208167 (+)	870	WP_201248848.1	ParA family protein	-
IL310_RS08165 (IL310_08170)	-	1208367..1208804 (+)	438	WP_201248847.1	hypothetical protein	-

Sequence

Protein

• Length: 351 a.a.
• Molecular weight: 40688.32 Da
• Isoelectric Point: 9.4240

>NTDB_id=718033 IL310_RS08135 WP_201248850.1 1203559..1204614(+) (xerS) [Lactococcus lactis strain LB7]
MSENHGYQYNVNKLMLEFPNYVNEYIQSKRVVPLSDASIYEYCLDFRKYLQWLIDGSITNHNQIKKITLQELENVTKHEL
EDFVLHERLRLESKCGSNTHTSALNRTIAAIKSLYNYLCEQTEDEHGNTYMTRNVSRLIHIRKKSETLHYRAAQLEGKLF
LGDETKAFLEFVEHNYENSISNRARASFKKNKIRDLAILSLFLSSGLRCAELVGINLHDLNLETGKVNVMRKEGKKDVVP
IAQFSHKYINNYFVTRSRIDTEIQAFFITDYDQKIRKISNASINKLVAKYSEAYKVRVTPHTLRHTFATRLYNVSHSQVL
VSNQLGHSSTKPTELYTHIVSAEAKDALSKL

Nucleotide

• Length: 1056 bp

>NTDB_id=718033 IL310_RS08135 WP_201248850.1 1203559..1204614(+) (xerS) [Lactococcus lactis strain LB7]
ATGTCAGAAAACCATGGTTATCAATACAATGTTAATAAACTAATGCTAGAATTTCCAAATTATGTTAACGAATATATTCA
ATCGAAAAGAGTTGTTCCGCTGAGTGACGCGTCAATATATGAATATTGCTTAGACTTTAGAAAGTACCTCCAATGGCTCA
TTGATGGTAGTATAACAAATCATAATCAAATCAAAAAAATTACCTTGCAAGAATTGGAAAATGTTACCAAACATGAATTG
GAGGACTTTGTGTTACATGAGAGACTACGTTTGGAATCTAAATGTGGGTCAAATACACATACTTCAGCTTTAAATCGAAC
AATTGCAGCGATTAAGAGCTTATATAACTATTTATGTGAGCAAACTGAAGATGAACATGGAAATACATACATGACCAGAA
ATGTCAGTCGTTTAATTCATATCCGAAAAAAAAGCGAGACCTTGCATTACCGTGCGGCTCAACTGGAAGGTAAACTATTC
CTTGGAGACGAAACCAAAGCCTTTTTAGAATTTGTTGAACATAACTATGAAAACTCTATCAGTAACCGTGCGAGAGCAAG
TTTTAAGAAAAATAAAATCAGAGATTTAGCTATATTAAGTCTTTTTCTATCTTCTGGATTACGTTGTGCGGAACTTGTAG
GGATCAATCTACACGATTTAAACCTTGAAACTGGGAAAGTAAATGTGATGAGAAAAGAGGGAAAAAAAGACGTTGTCCCG
ATTGCCCAGTTTTCACACAAATATATAAATAATTATTTTGTGACAAGAAGTAGAATAGATACTGAGATACAAGCCTTTTT
CATAACAGATTACGACCAAAAAATAAGAAAAATCTCTAACGCTTCAATAAATAAGCTAGTGGCGAAGTATTCAGAAGCCT
ATAAAGTTCGTGTGACACCTCATACACTAAGACATACATTCGCAACGAGGCTCTATAATGTCAGTCACTCTCAAGTTCTT
GTCAGCAATCAATTAGGGCATTCATCAACTAAACCTACAGAACTATATACCCACATTGTCAGTGCTGAAGCTAAAGATGC
ATTAAGCAAGTTATAA

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (184-339)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	46.132	99.43	0.459