Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   MGCS36089_RS09600 Genome accession   NZ_CP117284
Coordinates   1951102..1952811 (-) Length   569 a.a.
NCBI ID   WP_046177243.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. equisimilis strain MGCS36089     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1946102..1957811
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MGCS36089_RS09580 (MGCS36089_03898) radA 1946434..1947795 (-) 1362 WP_110408183.1 DNA repair protein RadA Machinery gene
  MGCS36089_RS09585 (MGCS36089_03900) - 1947878..1948324 (-) 447 WP_003053378.1 dUTP diphosphatase -
  MGCS36089_RS09590 (MGCS36089_03902) - 1948432..1949199 (-) 768 WP_014612596.1 epoxyqueuosine reductase QueH -
  MGCS36089_RS09595 (MGCS36089_03904) - 1949318..1951102 (-) 1785 WP_275926230.1 ABC transporter ATP-binding protein -
  MGCS36089_RS09600 (MGCS36089_03906) rcrP 1951102..1952811 (-) 1710 WP_046177243.1 ABC transporter ATP-binding protein Regulator
  MGCS36089_RS09605 (MGCS36089_03908) rcrR 1952804..1953253 (-) 450 WP_003053369.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  MGCS36089_RS09610 (MGCS36089_03910) - 1953454..1954470 (+) 1017 WP_003053365.1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase -
  MGCS36089_RS09615 (MGCS36089_03912) hasC 1954502..1955404 (+) 903 WP_003061497.1 UTP--glucose-1-phosphate uridylyltransferase HasC -
  MGCS36089_RS09620 (MGCS36089_03914) - 1955584..1956210 (+) 627 WP_152872966.1 DUF6198 family protein -
  MGCS36089_RS09625 (MGCS36089_03916) - 1956387..1957061 (-) 675 WP_065358751.1 rhomboid family intramembrane serine protease -
  MGCS36089_RS09630 (MGCS36089_03918) - 1957058..1957585 (-) 528 WP_065358752.1 5-formyltetrahydrofolate cyclo-ligase -

Sequence

Protein


Download         Length: 569 a.a.        Molecular weight: 63361.98 Da        Isoelectric Point: 5.6522

>NTDB_id=717341 MGCS36089_RS09600 WP_046177243.1 1951102..1952811(-) (rcrP) [Streptococcus dysgalactiae subsp. equisimilis strain MGCS36089]
MLKEAILRYKWYALGSLIMIIGVVASSLLQPHYLKDVLSAVIQNNQDKIYNVGILLLIIALMGLIAGAVNTILAAKIAQG
VSADIREKTFRKIQSFSYANVEAFNAGNLVVRMTNDINQIQNLVMMLFQVLFRLPILFIGAFIMAVQTLPDLWWVIVLMV
ILIGLIMALVMSQMGPRFGKFQKLMDKINRIAKENLRGVRVVKSFVQEREQYAKFKETSNELLDLNLFIGYGFSLMQPAL
MLVSYLAVYVSIYMVSGMVETDPTVIGNIASFMTYMMQIMFSIIMVGFMGMQASRAFVSIGRLKEVLDTESTMTFDTEQE
EEVSGSIVFEDVSFTYPNDDEPTLRHISFRIEPGQMVGVVGATGAGKSTLAQLIPRLFDPQEGQILLGGKPIKSLSQATL
RQTVSIVLQKAILFSGTIADNLRQGSATSDDYAMERAARIAQAKEFIDRMDDRYESQVEERGNNFSGGQKQRMSIARGVI
NQPKILVLDDSTSALDAKSERLVQEALNKELKETTTVIIAQKISSVVKADKILVLDQGQLIGEGTHAELVANNAIYREIY
ETQKGKEED

Nucleotide


Download         Length: 1710 bp        

>NTDB_id=717341 MGCS36089_RS09600 WP_046177243.1 1951102..1952811(-) (rcrP) [Streptococcus dysgalactiae subsp. equisimilis strain MGCS36089]
ATGCTTAAAGAAGCGATTTTGCGTTACAAATGGTACGCATTGGGCTCGCTCATCATGATTATTGGGGTGGTAGCGAGCAG
TTTGCTTCAGCCTCATTATTTAAAAGATGTGCTGAGTGCTGTTATTCAAAATAACCAAGATAAGATTTACAATGTGGGGA
TATTGTTGCTTATCATTGCGCTGATGGGATTGATTGCAGGGGCAGTTAATACTATTTTAGCTGCTAAGATTGCTCAAGGG
GTCTCAGCGGATATTCGTGAGAAGACCTTCCGAAAAATTCAGAGTTTTTCTTATGCCAATGTAGAAGCTTTCAATGCTGG
GAACCTCGTGGTTCGGATGACCAATGATATTAATCAAATTCAAAATTTGGTAATGATGCTGTTTCAAGTGCTTTTTCGTC
TGCCGATTCTCTTTATTGGAGCTTTTATCATGGCGGTGCAGACCCTACCTGACTTGTGGTGGGTGATTGTGCTGATGGTT
ATTTTAATTGGTCTTATCATGGCTTTGGTCATGAGTCAGATGGGCCCACGTTTTGGGAAATTCCAAAAGTTGATGGACAA
GATCAATCGAATTGCTAAGGAAAATCTTCGTGGCGTGCGTGTGGTTAAATCTTTTGTGCAAGAACGGGAACAATATGCCA
AATTTAAAGAAACGTCCAATGAACTATTAGATTTGAATCTCTTTATAGGCTACGGTTTTTCGTTGATGCAACCTGCTTTG
ATGTTGGTATCTTATCTGGCAGTGTACGTGTCCATCTATATGGTTTCAGGCATGGTTGAAACAGATCCTACCGTTATTGG
GAATATTGCTTCTTTCATGACTTATATGATGCAAATCATGTTTTCAATTATCATGGTTGGCTTTATGGGCATGCAAGCAA
GTCGTGCCTTTGTCTCTATTGGTCGTCTCAAAGAGGTGCTAGATACTGAGTCAACCATGACCTTTGACACCGAGCAAGAA
GAAGAGGTTTCAGGTAGTATTGTCTTTGAGGATGTCAGCTTTACTTATCCTAATGATGATGAGCCGACCTTACGCCATAT
TTCCTTTAGGATTGAACCTGGTCAAATGGTTGGTGTTGTCGGTGCTACTGGTGCTGGGAAGTCTACACTGGCACAGCTTA
TTCCGCGCTTGTTTGACCCGCAAGAAGGTCAAATCTTGCTGGGAGGCAAACCGATTAAATCCTTGAGCCAAGCGACTCTT
CGTCAAACGGTTTCTATCGTGTTGCAAAAGGCTATTCTTTTTTCGGGAACCATTGCAGACAATCTCCGTCAAGGATCAGC
AACTTCAGATGATTATGCCATGGAACGAGCAGCGCGTATTGCTCAAGCCAAAGAATTTATCGATCGTATGGATGACCGCT
ATGAAAGCCAAGTGGAAGAACGGGGCAATAACTTCTCTGGTGGTCAAAAACAACGGATGTCGATTGCGCGTGGTGTCATT
AACCAACCTAAGATTCTTGTATTGGATGACTCAACCTCGGCTCTGGATGCCAAGTCAGAAAGATTAGTTCAAGAAGCCTT
GAATAAAGAGTTGAAAGAGACCACCACAGTGATCATTGCCCAAAAAATTTCGTCAGTGGTAAAGGCTGATAAGATTTTAG
TTCTCGATCAGGGCCAACTGATTGGCGAAGGAACTCATGCTGAGTTGGTAGCTAATAATGCGATTTATCGTGAAATTTAT
GAGACCCAAAAAGGGAAGGAGGAAGACTAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(16-282)

ABC transporter (ABC_tran)

(344-493)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

34.915

100

0.362