Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   PGH47_RS24145 Genome accession   NZ_CP116353
Coordinates   5404141..5405265 (-) Length   374 a.a.
NCBI ID   WP_030958303.1    Uniprot ID   A0A7H8T8E1
Organism   Streptomyces sp. HUAS 31     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 5399141..5410265
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PGH47_RS24120 (PGH47_24120) - 5399632..5400222 (-) 591 WP_271668137.1 hypothetical protein -
  PGH47_RS24125 (PGH47_24125) - 5400381..5400920 (-) 540 WP_030961701.1 SigE family RNA polymerase sigma factor -
  PGH47_RS24130 (PGH47_24130) - 5401234..5402172 (-) 939 WP_271665178.1 A/G-specific adenine glycosylase -
  PGH47_RS24135 (PGH47_24135) - 5402366..5402728 (+) 363 WP_271665179.1 hypothetical protein -
  PGH47_RS24140 (PGH47_24140) - 5403121..5403954 (+) 834 WP_271665180.1 hypothetical protein -
  PGH47_RS24145 (PGH47_24145) disA 5404141..5405265 (-) 1125 WP_030958303.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  PGH47_RS24150 (PGH47_24150) radA/sms 5405346..5406755 (-) 1410 WP_271665181.1 DNA repair protein RadA Machinery gene
  PGH47_RS24155 (PGH47_24155) - 5406971..5408767 (+) 1797 WP_271665182.1 hypothetical protein -
  PGH47_RS24160 (PGH47_24160) - 5408806..5409666 (-) 861 WP_271665183.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40110.79 Da        Isoelectric Point: 4.9201

>NTDB_id=709544 PGH47_RS24145 WP_030958303.1 5404141..5405265(-) (disA) [Streptomyces sp. HUAS 31]
MAANDRAAAPGKSGGSSGADGLMRASLSAVAPGTALRDGLERVLRGNTGGLIVLGFDKTVESMSTGGFVLDVEFTATRLR
ELCKLDGGIVLSSDLSKILRAGVQFVPDATIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALYELDALTHAELLELPTVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=709544 PGH47_RS24145 WP_030958303.1 5404141..5405265(-) (disA) [Streptomyces sp. HUAS 31]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGCGGGAGTTCCGGTGCCGATGGCCTGATGCGCGCCTCACT
GAGCGCGGTGGCTCCCGGCACCGCCTTGCGCGACGGGCTCGAACGCGTCCTGCGCGGCAACACCGGCGGACTCATCGTGC
TCGGCTTCGACAAGACCGTCGAGTCGATGAGCACGGGTGGATTCGTCCTGGATGTCGAGTTCACGGCTACGCGACTGCGT
GAGCTGTGCAAGCTCGACGGCGGCATCGTCCTGTCGTCCGACCTGTCGAAGATCCTTCGCGCGGGTGTGCAGTTCGTGCC
GGACGCGACGATCCCCACGGAGGAGACCGGAACCCGGCACCGCACGGCGGACCGGGTCAGCAAGCAGGTCGGCTTCCCGG
TCGTCTCGGTCTCCCAGTCGATGCGGCTGATCGCGCTCTACGTCGACGGCCAGCGCCGCGTCCTGGAGGACTCGGCGGCG
ATCCTGTCCCGCGCCAACCAGGCCCTCGCGACCCTGGAGCGCTACAAGCTCCGCCTGGACGAGGTCGCGGGAACGTTGTC
AGCGCTGGAGATCGAGGACCTGGTGACGGTCCGCGACGTCTCGGCGGTGGCGCAGCGCCTGGAGATGGTCCGGCGCATCG
CGACGGAGATCGCCGAGTACGTGGTGGAGCTGGGCACCGACGGCCGTCTTCTCGCCCTCCAGCTGGACGAGTTGATCGCG
GGCGTGGAGCCCGAGCGCGAGCTCGTGGTGCGCGACTACGTCCCCGAGCCGACGGCCAAGCGCTCCCGCACGGTCGACGA
GGCGCTGTACGAACTGGACGCGCTCACCCACGCCGAGCTGCTCGAACTGCCCACGGTGGCACGGGCGTTGGGCTACACCG
GCTCTCCGGAGGCGCTGGACTCGGCGGTCTCTCCGCGCGGCTTCCGTCTGCTGGCCAAGGTGCCCAGGCTGCCCGGCGCG
ATCATCGACCGCCTGGTGGAGCACTTCGGCGGCCTCCAGAAGCTGCTCGCCGCCAGCGTGGACGACCTCCAGACGGTCGA
CGGCGTCGGCGAGGCCCGGGCACGCAGCGTCCGCGAGGGCCTGTCGCGGCTGGCGGAGAGCTCGATCCTGGAACGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7H8T8E1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.706

96.524

0.441