Detailed information NTG0709445

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: NMT99_RS02155
• Genome accession: NZ_CP101290
• Coordinates: 427054..428202 (+)
• Length: 382 a.a.
• NCBI ID: WP_014475800.1
• Uniprot ID: A0A0D1KXJ1
• Organism: Bacillus subtilis strain LjM2
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 422054..433202

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NMT99_RS02135	yclH	422431..423111 (-)	681	WP_003234507.1	ABC transporter ATP-binding protein	-
NMT99_RS02140	yclI	423127..424587 (-)	1461	WP_015252826.1	ABC transporter permease	-
NMT99_RS02145	yclJ	424800..425483 (+)	684	WP_015482792.1	two-component system response regulator YclJ	-
NMT99_RS02150	yclK	425470..426891 (+)	1422	WP_080477807.1	two-component system sensor histidine kinase YclK	-
NMT99_RS02155	rapC	427054..428202 (+)	1149	WP_014475800.1	response regulator aspartate phosphatase RapC	Regulator
NMT99_RS02160	phrC	428186..428308 (+)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
NMT99_RS02165	yczM	428408..428497 (-)	90	WP_015482794.1	YjcZ family sporulation protein	-
NMT99_RS02170	yczN	428579..428692 (-)	114	WP_032678937.1	YjcZ family sporulation protein	-
NMT99_RS02175	thrD	428845..430209 (-)	1365	WP_029726569.1	aspartate kinase	-
NMT99_RS02180	ceuB	430594..431544 (+)	951	WP_014475804.1	petrobactin ABC transporter permease YclN	Machinery gene
NMT99_RS02185	yclO	431537..432484 (+)	948	WP_015252820.1	petrobactin ABC transporter permease YclO	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45649.65 Da
• Isoelectric Point: 4.9618

>NTDB_id=709445 NMT99_RS02155 WP_014475800.1 427054..428202(+) (rapC) [Bacillus subtilis strain LjM2]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLD
PAIDYFEKAVSTFESSRIVNSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYQDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=709445 NMT99_RS02155 WP_014475800.1 427054..428202(+) (rapC) [Bacillus subtilis strain LjM2]
ATGAAGAGCGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAACCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAATTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTTTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAATGCCATTT
CGTCTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTAGCGCTCAATATGGCCC
AAGCGGAACAAAAAGCCCAGCTGGTCGGAAGAGCATACTACAATCTCGGATTATGCTATTACAATCAAGACCTTCTAGAC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTCCACGTTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCAGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAGTACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

3D structure

• AlphaFold DB: A0A0D1KXJ1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	99.738	100	0.997
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568