Detailed information NTG0705299

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: NLY75_RS00765
• Genome accession: NZ_CP100432
• Coordinates: 116923..117357 (+)
• Length: 144 a.a.
• NCBI ID: WP_023369086.1
• Uniprot ID: -
• Organism: Streptococcus suis T15
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 111923..122357

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NLY75_RS00730 (NLY75_00730)	-	112665..113030 (+)	366	WP_023369079.1	DUF1033 family protein	-
NLY75_RS00735 (NLY75_00735)	-	113065..114015 (-)	951	WP_023369081.1	S66 peptidase family protein	-
NLY75_RS00740 (NLY75_00740)	comYA	114101..115051 (+)	951	WP_023369082.1	competence type IV pilus ATPase ComGA	Machinery gene
NLY75_RS00745 (NLY75_00745)	comYB	114963..116000 (+)	1038	WP_256786938.1	competence type IV pilus assembly protein ComGB	Machinery gene
NLY75_RS00750 (NLY75_00750)	comYC	116002..116283 (+)	282	WP_011921720.1	competence type IV pilus major pilin ComGC	Machinery gene
NLY75_RS00755 (NLY75_00755)	comGD	116264..116671 (+)	408	WP_011921721.1	competence type IV pilus minor pilin ComGD	-
NLY75_RS00760 (NLY75_00760)	comYE	116643..116936 (+)	294	WP_011921722.1	competence type IV pilus minor pilin ComGE	Machinery gene
NLY75_RS00765 (NLY75_00765)	comGF/cglF	116923..117357 (+)	435	WP_023369086.1	competence type IV pilus minor pilin ComGF	Machinery gene
NLY75_RS00770 (NLY75_00770)	comGG	117335..117745 (+)	411	WP_011921724.1	competence type IV pilus minor pilin ComGG	-
NLY75_RS00775 (NLY75_00775)	comYH	117802..118755 (+)	954	WP_011922562.1	class I SAM-dependent methyltransferase	Machinery gene
NLY75_RS00780 (NLY75_00780)	-	118805..119992 (+)	1188	WP_023369088.1	acetate kinase	-
NLY75_RS00785 (NLY75_00785)	-	120307..120858 (+)	552	WP_023369090.1	folate family ECF transporter S component	-
NLY75_RS00790 (NLY75_00790)	-	120914..122170 (+)	1257	WP_023369092.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 16481.81 Da
• Isoelectric Point: 5.9234

>NTDB_id=705299 NLY75_RS00765 WP_023369086.1 116923..117357(+) (comGF/cglF) [Streptococcus suis T15]
MLKSKISAFTLLECLVVLVILSGSLLIFEGLSKLLVQEAHYQGQTVQKEWLVFSSQLRSEWDQAELVKVENGKVYVNKGE
QALAFGKSWSDDFRKTNDRGQGYQPMLYQVDSAAISQENQLVRIDFSFKNGEERTFIYAFKEKS

Nucleotide

• Length: 435 bp

>NTDB_id=705299 NLY75_RS00765 WP_023369086.1 116923..117357(+) (comGF/cglF) [Streptococcus suis T15]
TTGTTAAAAAGTAAAATTTCTGCTTTTACACTCTTGGAATGTTTGGTGGTTCTAGTCATTCTGTCAGGTAGCCTCTTGAT
TTTTGAAGGCTTATCCAAATTACTAGTCCAGGAAGCGCATTATCAAGGTCAGACCGTTCAAAAGGAATGGTTGGTCTTCT
CTAGCCAATTGCGGTCGGAGTGGGACCAGGCTGAATTGGTCAAGGTTGAAAATGGCAAGGTCTATGTCAACAAAGGTGAA
CAGGCTTTGGCCTTTGGCAAGTCATGGTCGGATGATTTTCGGAAAACAAATGATAGAGGCCAGGGTTACCAACCCATGCT
CTATCAGGTGGATAGCGCAGCCATTTCCCAAGAAAACCAGCTGGTGCGCATCGACTTTAGCTTTAAAAACGGAGAGGAGC
GAACCTTTATCTATGCTTTTAAAGAAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (37-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae TIGR4	52.482	97.917	0.514
comGF/cglF	Streptococcus pneumoniae Rx1	52.482	97.917	0.514
comGF/cglF	Streptococcus pneumoniae D39	52.482	97.917	0.514
comGF/cglF	Streptococcus pneumoniae R6	52.482	97.917	0.514
comGF/cglF	Streptococcus mitis NCTC 12261	52.985	93.056	0.493
comYF	Streptococcus mutans UA140	48.611	100	0.486
comYF	Streptococcus mutans UA159	47.917	100	0.479
comGF/cglF	Streptococcus mitis SK321	50	93.056	0.465
comGF	Lactococcus lactis subsp. cremoris KW2	45.39	97.917	0.444