Detailed information NTG0701362

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: PCP87_RS10265
• Genome accession: NZ_CP115277
• Coordinates: 2144905..2145930 (-)
• Length: 341 a.a.
• NCBI ID: WP_003097294.1
• Uniprot ID: A0A0H2ZJL6
• Organism: Pseudomonas aeruginosa strain F012
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2139905..2150930

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PCP87_RS10240 (PCP87_10250)	aroE	2140107..2140931 (-)	825	WP_003111201.1	shikimate dehydrogenase	-
PCP87_RS10245 (PCP87_10255)	hemF	2140989..2141906 (-)	918	WP_003097311.1	oxygen-dependent coproporphyrinogen oxidase	-
PCP87_RS10250 (PCP87_10260)	-	2142097..2143074 (+)	978	WP_003111202.1	NADPH:quinone reductase	-
PCP87_RS10255 (PCP87_10265)	-	2143084..2143641 (-)	558	WP_003097300.1	L-threonylcarbamoyladenylate synthase	-
PCP87_RS10260 (PCP87_10270)	dprA	2143682..2144770 (-)	1089	WP_003123764.1	DNA-processing protein DprA	Machinery gene
PCP87_RS10265 (PCP87_10275)	tsaP	2144905..2145930 (-)	1026	WP_003097294.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
PCP87_RS10270 (PCP87_10280)	def	2146069..2146575 (+)	507	WP_003107059.1	peptide deformylase	-
PCP87_RS10275 (PCP87_10285)	fmt	2146630..2147574 (+)	945	WP_010793609.1	methionyl-tRNA formyltransferase	-
PCP87_RS10280 (PCP87_10290)	rsmB	2147571..2148875 (+)	1305	WP_003458403.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
PCP87_RS10285 (PCP87_10295)	trkA	2148903..2150276 (+)	1374	WP_003107053.1	Trk system potassium transporter TrkA	-
PCP87_RS10290 (PCP87_10300)	-	2150425..2150742 (+)	318	WP_003120685.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37586.01 Da
• Isoelectric Point: 9.3358

>NTDB_id=701362 PCP87_RS10265 WP_003097294.1 2144905..2145930(-) (tsaP) [Pseudomonas aeruginosa strain F012]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP

Nucleotide

• Length: 1026 bp

>NTDB_id=701362 PCP87_RS10265 WP_003097294.1 2144905..2145930(-) (tsaP) [Pseudomonas aeruginosa strain F012]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCCCACCTGATCTACCCCGGCGACACACTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGTGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTATGCC
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTGGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA

Domains

Predicted by InterProScan.

• LysM domain (LysM) (31-76)

3D structure

• AlphaFold DB: A0A0H2ZJL6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	36.512	100	0.393