Detailed information NTG0700557

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: NGM67_RS07690
• Genome accession: NZ_CP099545
• Coordinates: 534277..537669 (-)
• Length: 1130 a.a.
• NCBI ID: WP_068946920.1
• Uniprot ID: -
• Organism: Photobacterium damselae strain XP-11
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 529277..542669

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NGM67_RS07675 (NGM67_07675)	-	529739..530764 (-)	1026	WP_005301317.1	ABC transporter permease	-
NGM67_RS07680 (NGM67_07680)	-	530767..531753 (-)	987	WP_065172285.1	ABC transporter permease	-
NGM67_RS07685 (NGM67_07685)	-	531900..533576 (-)	1677	WP_068946919.1	ABC transporter substrate-binding protein	-
NGM67_RS07690 (NGM67_07690)	chiS	534277..537669 (-)	3393	WP_068946920.1	response regulator	Regulator
NGM67_RS07695 (NGM67_07695)	rsmC	537983..539002 (-)	1020	WP_252690115.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
NGM67_RS07700 (NGM67_07700)	-	539202..540290 (-)	1089	WP_005301309.1	AI-2E family transporter	-
NGM67_RS07705 (NGM67_07705)	hemL	540663..541955 (-)	1293	WP_005301305.1	glutamate-1-semialdehyde 2,1-aminomutase	-

Sequence

Protein

• Length: 1130 a.a.
• Molecular weight: 127168.28 Da
• Isoelectric Point: 6.6791

>NTDB_id=700557 NGM67_RS07690 WP_068946920.1 534277..537669(-) (chiS) [Photobacterium damselae strain XP-11]
MQTKQRFKRLQHTLMLAFLVLSITPLTLSALYFLNSHSKDLAEQSTSHLASLLENKKKQLSQFFAAKESEVQSFARSELA
NASGGRFYGLVGAYHQLGNINNLLNGLTREQYFKEILTAKGQKSTTNSASYVGHERYRLMYKRYNWAFDEYLKRSDFSDI
LLVDLKGNVVYSAKKPQYFALNLASGKGALKGLQPTFQAISTQAQQLKQDQEVVPVAFADFNLGGNNQSEQAWFAAPIIQ
QGYLHSYVFFQLDINKIATLLADKPQNGQTVQTLLVGQDHHMRLPNSGDLPQQLISPAINQALAGKTGVGSLLNYNNIAV
LSAFTPIKIFNHTWALVVELPEKEAFARIHQLEKIFFAAMLTAIVLVILAALWLSNSITAPLLRLTWASERVSAGDLEQK
IEGTERKDEIGRLATSFARMQCSIREKMSLISKQNQELEKNIHVIKQQNDDLQTADKLKDEFLATTSHELRTPLHGMIGI
AESLLAGANGPMQGAQRRQLEMLINSGQRLTNLVDDLLDYHKMRYGDLDIDKHAVDLASAVRLVLELSGHLLGTKPVRII
NQIPADLPLVQADEQRLEQVLYNLVGNAIKYTSEGKIVLSATVLENQVRIQVVDTGQGIPAEQLEHIFEPLVQANTNHAN
YRQGAGLGLTISRQLLELMGGRLYVSSQPMVGTTFSFTLNIASDEQIRQSHDHGKIHHFQAPLCDATPIEMANLPENLNG
ELLLVVDDEPVNLQILNNFLRLEGYRVLTAESGKQALELVQSHKPALILLDIMMPEMSGYEVCSQLRQQYTPLELPIMML
SALGQVKDRVKGFECGANDYLTKPFNKEELTARIKAHLQAGKTEFEREKNRQLAQEIQQRKQVELSLLETQTRLLGLLES
TTEAILCIQNSGRIRYANDAAAKLFKRTPEQLERHSIDELLLTHLPDELQNNHHYSGSLCFKIGEQQQNLATDILNLPEE
SGLKQMFIFGNSGPSPQQRVQMLEEAIDVLSSYAFDGDKDNLQQLRELGGEFTRLADKLGNDAPNKQDILRELLVDAMRT
TLEVWEQDTKKTKFDLAEESGLWRVYLDRSTLQTRTLDKYLHVETLPKTPRWRTVISTIDYVLDKGSAQNIQHQQLSQMR
DKLQNLLRAS

Nucleotide

• Length: 3393 bp

>NTDB_id=700557 NGM67_RS07690 WP_068946920.1 534277..537669(-) (chiS) [Photobacterium damselae strain XP-11]
ATGCAAACAAAACAACGATTTAAACGTCTTCAGCATACATTAATGCTGGCTTTTCTTGTTCTTAGTATTACGCCATTAAC
TCTCTCCGCACTGTATTTCCTCAACTCACACTCCAAGGATTTGGCAGAGCAAAGCACATCGCACTTGGCGTCTCTTCTTG
AGAATAAGAAAAAACAACTAAGCCAATTTTTTGCGGCTAAAGAGTCTGAGGTGCAAAGTTTTGCTCGATCAGAGCTTGCT
AATGCCAGCGGTGGCCGCTTCTATGGGTTAGTAGGGGCTTACCATCAATTAGGTAATATCAATAACCTGTTAAATGGCCT
GACGCGAGAGCAGTATTTTAAAGAGATTCTCACGGCAAAAGGGCAAAAAAGTACCACCAACAGTGCCAGTTATGTCGGCC
ATGAGCGCTATCGTTTAATGTATAAGCGTTATAACTGGGCATTTGATGAATATCTTAAGCGCTCAGATTTTAGTGATATC
TTATTGGTTGATTTAAAAGGTAATGTGGTCTATTCCGCGAAAAAACCACAGTACTTTGCTTTAAATCTTGCTTCAGGCAA
GGGGGCCTTAAAAGGGTTACAACCAACTTTCCAAGCCATTAGCACTCAAGCTCAACAGCTAAAACAAGACCAAGAAGTCG
TCCCCGTTGCTTTTGCCGATTTTAACCTAGGAGGCAATAATCAGTCAGAACAAGCCTGGTTTGCTGCCCCAATCATTCAA
CAAGGGTATTTACACAGCTACGTATTTTTCCAGCTCGATATCAATAAAATCGCAACCTTACTGGCCGATAAACCGCAAAA
TGGGCAAACGGTTCAAACTCTATTAGTAGGCCAAGATCATCACATGCGCTTACCCAATAGTGGAGATTTGCCACAACAAT
TAATCAGCCCAGCCATCAACCAAGCACTTGCAGGTAAAACAGGGGTAGGCAGTTTACTTAACTACAATAATATTGCCGTA
CTCAGTGCCTTTACTCCGATTAAAATCTTTAACCACACCTGGGCATTGGTAGTTGAATTACCCGAAAAAGAAGCATTTGC
TCGTATTCATCAACTCGAAAAAATCTTTTTTGCAGCCATGCTTACTGCCATCGTATTAGTGATTTTAGCCGCTCTTTGGT
TATCAAACTCAATAACGGCTCCCCTATTACGCTTAACTTGGGCATCAGAGCGAGTCTCTGCAGGCGATCTAGAACAAAAA
ATCGAAGGAACAGAACGTAAAGATGAAATTGGTCGTCTTGCCACTAGCTTTGCTCGAATGCAATGTTCTATTCGGGAAAA
GATGAGTTTGATTAGCAAGCAAAATCAAGAACTTGAAAAAAATATTCACGTAATCAAACAACAAAATGATGATCTGCAAA
CCGCCGATAAACTAAAAGATGAGTTCTTAGCGACAACCTCACATGAGTTGCGCACCCCTCTTCACGGTATGATTGGGATA
GCCGAATCCTTACTTGCTGGAGCAAATGGGCCAATGCAAGGAGCCCAACGTCGTCAATTGGAAATGTTGATCAACAGTGG
GCAGCGTCTAACGAACTTAGTTGATGATTTACTCGATTATCACAAAATGCGTTATGGCGATCTCGATATTGATAAACATG
CAGTCGATCTTGCCAGCGCTGTTCGGTTAGTTCTTGAATTATCAGGCCATTTATTGGGAACCAAACCGGTTCGAATCATT
AACCAAATACCCGCTGATTTACCTTTAGTTCAAGCCGATGAACAACGCCTAGAGCAAGTGCTGTATAACTTGGTTGGTAA
TGCAATCAAATATACCTCTGAAGGTAAGATTGTGCTTTCTGCAACAGTATTGGAAAACCAAGTTCGCATTCAAGTGGTTG
ATACAGGACAAGGAATTCCGGCAGAACAACTTGAACACATCTTTGAACCATTAGTTCAAGCCAACACCAATCATGCCAAC
TATCGTCAAGGGGCGGGCCTTGGTTTAACCATTAGCCGTCAATTACTGGAGTTAATGGGTGGTCGCCTGTACGTCAGCAG
TCAGCCAATGGTGGGAACCACTTTTAGTTTCACCCTAAACATTGCCTCCGACGAACAAATTCGCCAAAGCCATGATCACG
GTAAAATTCATCACTTCCAAGCTCCATTGTGTGATGCCACTCCGATTGAAATGGCAAATTTACCTGAAAACTTAAATGGC
GAACTACTACTCGTGGTTGATGATGAACCCGTTAATCTTCAGATACTCAATAACTTCCTAAGACTTGAAGGGTATAGAGT
TCTCACTGCAGAAAGCGGAAAACAGGCCCTTGAGTTAGTACAAAGCCACAAACCTGCACTGATTTTGCTCGATATTATGA
TGCCAGAAATGAGTGGTTATGAGGTTTGTAGTCAATTGCGCCAACAATATACCCCATTAGAACTACCGATCATGATGCTA
TCTGCATTGGGGCAAGTTAAAGATCGCGTTAAAGGCTTTGAATGCGGCGCCAATGATTACCTAACAAAACCTTTTAATAA
AGAAGAGCTTACCGCACGTATAAAAGCCCATCTTCAAGCGGGAAAAACTGAATTTGAGCGAGAAAAAAATCGTCAATTAG
CGCAAGAAATTCAACAACGTAAGCAAGTTGAGTTAAGTTTACTTGAGACCCAAACTCGATTACTTGGCCTATTAGAATCC
ACCACCGAAGCCATTTTATGTATTCAAAATAGTGGGCGAATTCGTTATGCCAATGACGCTGCGGCTAAGTTATTTAAACG
CACCCCAGAACAATTGGAGCGCCACTCTATCGATGAACTACTGCTAACCCACTTACCTGATGAGTTACAAAATAATCATC
ATTACAGTGGTTCACTGTGTTTCAAAATTGGCGAACAACAACAAAACCTTGCTACCGATATCCTCAATTTGCCAGAAGAG
TCTGGACTTAAGCAGATGTTTATCTTCGGCAATAGCGGGCCATCGCCACAGCAACGAGTACAAATGCTCGAAGAAGCTAT
TGATGTTTTATCGAGCTATGCTTTTGATGGTGACAAAGACAACTTACAACAATTGCGTGAGCTAGGTGGAGAATTCACCA
GACTGGCAGACAAATTGGGTAATGATGCCCCTAATAAACAAGATATTTTGCGCGAATTGCTGGTTGATGCCATGCGTACA
ACGCTTGAGGTTTGGGAGCAAGATACGAAAAAAACCAAGTTTGATTTAGCCGAAGAGAGTGGATTATGGCGTGTTTATCT
CGATCGCAGTACGCTACAAACTCGCACCTTAGATAAATATCTCCATGTTGAGACTCTTCCTAAAACGCCGCGTTGGCGCA
CGGTTATTAGCACCATAGACTATGTTCTTGATAAAGGCAGTGCTCAAAATATCCAACATCAACAGCTGAGCCAGATGCGA
GATAAATTGCAGAACTTATTACGAGCAAGTTAA

Domains

Predicted by InterproScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (459-524)

• Response regulator receiver domain (Response_reg) (724-835)

• HAMP domain (HAMP) (373-421)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (573-680)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	58.938	100	0.589