Detailed information
Bioinformatically predicted
Overview
| Name | pilZ | Type | Machinery gene |
| Locus tag | PCP78_RS11645 | Genome accession | NZ_CP115253 |
| Coordinates | 2463653..2464009 (+) | Length | 118 a.a. |
| NCBI ID | WP_003091119.1 | Uniprot ID | A0A0H2ZD30 |
| Organism | Pseudomonas aeruginosa strain F033 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2458653..2469009
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PCP78_RS11620 (PCP78_11620) | fabF | 2458865..2460109 (+) | 1245 | WP_003104132.1 | beta-ketoacyl-ACP synthase II | - |
| PCP78_RS11625 (PCP78_11625) | pabC | 2460109..2460924 (+) | 816 | WP_003110198.1 | aminodeoxychorismate lyase | - |
| PCP78_RS11630 (PCP78_11630) | mltG | 2460930..2461979 (+) | 1050 | WP_003104128.1 | endolytic transglycosylase MltG | - |
| PCP78_RS11635 (PCP78_11635) | tmk | 2462008..2462640 (+) | 633 | WP_003091125.1 | dTMP kinase | - |
| PCP78_RS11640 (PCP78_11640) | - | 2462633..2463619 (+) | 987 | WP_010793191.1 | DNA polymerase III subunit delta' | - |
| PCP78_RS11645 (PCP78_11645) | pilZ | 2463653..2464009 (+) | 357 | WP_003091119.1 | PilZ domain-containing protein | Machinery gene |
| PCP78_RS11650 (PCP78_11650) | - | 2464024..2464800 (+) | 777 | WP_003091117.1 | TatD family hydrolase | - |
| PCP78_RS11655 (PCP78_11655) | - | 2465026..2466159 (-) | 1134 | WP_010793190.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| PCP78_RS11660 (PCP78_11660) | - | 2466245..2466883 (+) | 639 | WP_003091114.1 | TetR/AcrR family transcriptional regulator | - |
| PCP78_RS11665 (PCP78_11665) | - | 2467033..2467929 (+) | 897 | WP_003091113.1 | radical SAM protein | - |
| PCP78_RS11670 (PCP78_11670) | - | 2467994..2468626 (+) | 633 | WP_010793189.1 | DUF4823 domain-containing protein | - |
Sequence
Protein
Download Length: 118 a.a. Molecular weight: 12903.98 Da Isoelectric Point: 9.9969
>NTDB_id=699223 PCP78_RS11645 WP_003091119.1 2463653..2464009(+) (pilZ) [Pseudomonas aeruginosa strain F033]
MSLPPNLGPRNGILSLTIKDKSVLYAAYMPFIRNGGLFIPTNKNYKLGDEVFMLLNLMEEPEKIPVAGKVVWITPKGAQG
NRAAGIGVQFNDGDNTARNKIETYLAGALKSDRPTHTM
MSLPPNLGPRNGILSLTIKDKSVLYAAYMPFIRNGGLFIPTNKNYKLGDEVFMLLNLMEEPEKIPVAGKVVWITPKGAQG
NRAAGIGVQFNDGDNTARNKIETYLAGALKSDRPTHTM
Nucleotide
Download Length: 357 bp
>NTDB_id=699223 PCP78_RS11645 WP_003091119.1 2463653..2464009(+) (pilZ) [Pseudomonas aeruginosa strain F033]
ATGAGTTTGCCACCCAATCTGGGGCCGCGTAACGGCATCCTGTCCTTGACCATCAAGGACAAGTCCGTGCTGTACGCCGC
CTACATGCCGTTCATCAGGAACGGCGGGCTGTTCATTCCCACCAACAAGAACTACAAGCTCGGCGACGAAGTCTTCATGC
TGCTCAACCTGATGGAAGAGCCGGAGAAGATCCCGGTGGCCGGCAAGGTCGTCTGGATCACCCCGAAGGGCGCCCAGGGC
AACCGTGCGGCTGGCATCGGCGTGCAGTTCAACGACGGTGACAACACCGCCCGCAACAAGATCGAAACCTACCTGGCCGG
GGCGCTGAAGTCGGACCGGCCGACCCACACGATGTAA
ATGAGTTTGCCACCCAATCTGGGGCCGCGTAACGGCATCCTGTCCTTGACCATCAAGGACAAGTCCGTGCTGTACGCCGC
CTACATGCCGTTCATCAGGAACGGCGGGCTGTTCATTCCCACCAACAAGAACTACAAGCTCGGCGACGAAGTCTTCATGC
TGCTCAACCTGATGGAAGAGCCGGAGAAGATCCCGGTGGCCGGCAAGGTCGTCTGGATCACCCCGAAGGGCGCCCAGGGC
AACCGTGCGGCTGGCATCGGCGTGCAGTTCAACGACGGTGACAACACCGCCCGCAACAAGATCGAAACCTACCTGGCCGG
GGCGCTGAAGTCGGACCGGCCGACCCACACGATGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilZ | Legionella pneumophila str. Paris |
49.074 |
91.525 |
0.449 |
| pilZ | Legionella pneumophila strain ERS1305867 |
49.074 |
91.525 |
0.449 |