Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   NF323_RS01245 Genome accession   NZ_CP098820
Coordinates   287521..288417 (+) Length   298 a.a.
NCBI ID   WP_030059207.1    Uniprot ID   -
Organism   Staphylococcus capitis strain XWZ     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 282521..293417
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NF323_RS01220 (NF323_01220) - 282836..282937 (+) 102 WP_016898541.1 SE2200 family small protein -
  NF323_RS01225 (NF323_01225) - 283121..284662 (+) 1542 Protein_241 NAD(P)H-binding protein -
  NF323_RS01230 (NF323_01230) - 284856..286340 (-) 1485 WP_030059210.1 alkaline phosphatase -
  NF323_RS01235 (NF323_01235) - 286667..286819 (+) 153 WP_002436229.1 hypothetical protein -
  NF323_RS01240 (NF323_01240) braR 286850..287515 (+) 666 WP_002436233.1 response regulator transcription factor Regulator
  NF323_RS01245 (NF323_01245) braS 287521..288417 (+) 897 WP_030059207.1 sensor histidine kinase Regulator
  NF323_RS01250 (NF323_01250) - 288527..289276 (+) 750 WP_030059205.1 ABC transporter ATP-binding protein -
  NF323_RS01255 (NF323_01255) - 289260..291293 (+) 2034 WP_211181652.1 ABC transporter permease -
  NF323_RS01260 (NF323_01260) - 291520..292392 (+) 873 WP_030059201.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 298 a.a.        Molecular weight: 34543.82 Da        Isoelectric Point: 5.6334

>NTDB_id=698172 NF323_RS01245 WP_030059207.1 287521..288417(+) (braS) [Staphylococcus capitis strain XWZ]
MFLSFIKSIRNEITIIFCIFLLFALIFYLFSLPFSAFGLALGIVLLIIVIHWWVKYLGFKRNEDLKEKVDNLENELTEVK
NRQVEYRNDVESYFLTWVHQIKTPITASQLLLERNEENVVNRVRQEIVQIDNYTSLALSYLKLLNEESDMTISSVTVNEL
IRPLIMKYRIQFIEQHTKIHYEKCEATVLTDAQWASIMIEQILNNALKYARGKDIWIEFDSAKQTLIIKDNGVGISKADI
PKIFDKGYSGYNGRLNEESSGIGLFIVKHISNHLNHEVDVDSGLGEGTTFKIHFPNED

Nucleotide


Download         Length: 897 bp        

>NTDB_id=698172 NF323_RS01245 WP_030059207.1 287521..288417(+) (braS) [Staphylococcus capitis strain XWZ]
ATGTTCCTATCTTTTATAAAATCGATTCGAAATGAGATTACAATTATATTTTGTATATTTTTATTATTTGCATTAATATT
TTACTTATTTTCATTACCATTTAGTGCCTTCGGTCTTGCGTTAGGAATCGTATTACTCATCATTGTTATTCATTGGTGGG
TAAAGTACCTTGGATTTAAGAGAAATGAGGATCTTAAAGAGAAGGTAGATAATTTGGAAAATGAATTAACTGAAGTAAAA
AATCGCCAAGTAGAATATCGTAATGATGTGGAAAGTTACTTTTTAACATGGGTACACCAAATTAAGACACCTATCACAGC
GTCACAACTATTACTCGAACGTAATGAAGAAAATGTTGTCAATCGCGTAAGACAAGAAATTGTTCAAATTGATAACTATA
CAAGCTTAGCATTGAGTTATTTAAAATTACTCAACGAAGAATCTGATATGACAATTTCATCAGTGACAGTGAATGAACTA
ATACGTCCGTTAATCATGAAATATCGAATTCAATTTATCGAACAACATACTAAAATACACTATGAAAAGTGTGAAGCAAC
TGTTTTAACGGATGCACAATGGGCGTCTATTATGATAGAACAAATTTTAAATAATGCTTTGAAGTACGCGCGTGGAAAAG
ACATTTGGATTGAATTTGATTCTGCTAAACAAACATTAATCATTAAAGACAATGGTGTAGGTATTAGTAAAGCAGATATT
CCTAAAATATTTGATAAAGGCTATTCTGGTTACAACGGCAGACTTAATGAAGAATCAAGCGGCATAGGATTGTTCATTGT
TAAGCATATTTCTAATCATTTGAATCATGAGGTCGATGTAGATTCAGGACTTGGTGAAGGTACGACATTTAAAATACATT
TTCCCAACGAAGATTAG

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(197-297)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

64.407

98.993

0.638