Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   N6H00_RS22140 Genome accession   NZ_CP114036
Coordinates   5228001..5229059 (-) Length   352 a.a.
NCBI ID   WP_268977070.1    Uniprot ID   A0ABY9V9R6
Organism   Streptomyces sp. S465     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 5223001..5234059
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N6H00_RS22115 (N6H00_22115) cseB 5223413..5224120 (-) 708 WP_268973554.1 two-component system response regulator CseB -
  N6H00_RS22120 (N6H00_22120) - 5224130..5224855 (-) 726 WP_268973555.1 hypothetical protein -
  N6H00_RS22125 (N6H00_22125) - 5224843..5225454 (-) 612 WP_268973556.1 SigE family RNA polymerase sigma factor -
  N6H00_RS22130 (N6H00_22130) - 5225745..5226671 (-) 927 WP_268973558.1 A/G-specific adenine glycosylase -
  N6H00_RS22135 (N6H00_22135) - 5226922..5227785 (+) 864 WP_268973559.1 hypothetical protein -
  N6H00_RS22140 (N6H00_22140) disA 5228001..5229059 (-) 1059 WP_268977070.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  N6H00_RS22145 (N6H00_22145) radA/sms 5229816..5231240 (-) 1425 WP_268973560.1 DNA repair protein RadA Machinery gene
  N6H00_RS22150 (N6H00_22150) - 5231451..5233145 (+) 1695 WP_268973561.1 sigma-70 family RNA polymerase sigma factor -
  N6H00_RS22155 (N6H00_22155) - 5233209..5234051 (-) 843 WP_268977071.1 hypothetical protein -

Sequence


Protein


Download         Length: 352 a.a.        Molecular weight: 38161.90 Da        Isoelectric Point: 5.0869

>NTDB_id=692159 N6H00_RS22140 WP_268977070.1 5228001..5229059(-) (disA) [Streptomyces sp. S465]
MRASLSAVAPGTALRDGLERVLRGNTGGLIVLGTDKTVESLCTGGFVIDVEFTATRLRELCKLDGALVLDKDITKIVRAG
VQLVPDAAIPTEETGTRHRTAQRVSIQTGFPVVSVSQSMRLIALYVDGQRRVLEDSAAILSRANQALATLERYKLRLDEV
AGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIAGVEPERELVARDYVPEPTAKRT
RTVADALAELDRLTHAELLELPIVARALGYTGSPETLDSAVSPRGFRLLAKVPRLPGAIIERLVEHFGGLQKLLAASVDD
LQMVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1059 bp        

>NTDB_id=692159 N6H00_RS22140 WP_268977070.1 5228001..5229059(-) (disA) [Streptomyces sp. S465]
ATGCGTGCCTCCCTGAGCGCGGTCGCGCCCGGCACGGCCCTGCGCGACGGCCTTGAGCGCGTCCTCCGGGGAAACACCGG
CGGCCTGATCGTGCTCGGCACCGACAAGACCGTCGAGTCGCTGTGTACCGGCGGCTTCGTCATCGACGTCGAGTTCACCG
CGACCCGGCTGCGCGAGCTGTGCAAGCTTGACGGCGCGCTGGTCCTCGACAAGGACATCACCAAGATCGTGCGGGCCGGG
GTGCAGCTGGTCCCCGACGCGGCGATCCCCACCGAGGAGACCGGCACCCGGCACCGCACCGCGCAGCGCGTCTCCATCCA
GACCGGGTTCCCGGTGGTCTCCGTCAGCCAGTCGATGCGGCTGATCGCGCTGTACGTCGACGGTCAGCGGCGGGTCCTGG
AGGATTCGGCGGCGATCCTCTCCCGTGCCAACCAGGCGCTGGCCACCCTGGAGCGCTACAAGCTCCGCCTCGACGAGGTC
GCGGGCACGCTCTCGGCCCTGGAGATCGAGGACCTGGTCACCGTCCGGGACGTGAGCGCGGTCGCGCAGCGGCTGGAGAT
GGTCCGGCGCATCGCCACCGAGATCGCGGAGTACGTGGTCGAGCTGGGCACGGACGGCCGGCTGCTCTCCCTCCAGCTGG
ACGAGCTGATCGCGGGCGTCGAGCCGGAGCGTGAGCTGGTGGCGCGCGACTACGTCCCCGAGCCGACCGCCAAGCGCACT
CGCACGGTGGCCGACGCGCTCGCCGAGCTGGACCGGCTGACCCACGCCGAGCTGCTCGAACTGCCCATCGTGGCCCGTGC
GCTGGGCTACACCGGCTCGCCCGAGACCCTCGACTCGGCGGTTTCGCCGCGTGGCTTCCGGCTGCTGGCCAAGGTGCCGC
GGCTTCCGGGCGCCATCATCGAGCGGCTGGTGGAGCACTTCGGTGGCCTGCAGAAGCTGCTGGCGGCGAGCGTGGACGAT
CTCCAGATGGTGGACGGCGTGGGCGAGGCGCGGGCGCGCTCGGTCCGCGAGGGCCTGTCGCGGCTTGCCGAGTCGTCCAT
CCTGGAGCGGTACGTCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

47.11

98.295

0.463