Detailed information
Bioinformatically predicted
Overview
| Name | pilZ | Type | Machinery gene |
| Locus tag | PALA48_RS10960 | Genome accession | NZ_CP110353 |
| Coordinates | 2274666..2275022 (+) | Length | 118 a.a. |
| NCBI ID | WP_003091119.1 | Uniprot ID | A0A0H2ZD30 |
| Organism | Pseudomonas aeruginosa strain PALA48 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2269666..2280022
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PALA48_RS10935 (PALA48_02171) | fabF | 2269878..2271122 (+) | 1245 | WP_003104132.1 | beta-ketoacyl-ACP synthase II | - |
| PALA48_RS10940 (PALA48_02172) | pabC | 2271122..2271937 (+) | 816 | WP_003110198.1 | aminodeoxychorismate lyase | - |
| PALA48_RS10945 (PALA48_02173) | mltG | 2271943..2272992 (+) | 1050 | WP_012613907.1 | endolytic transglycosylase MltG | - |
| PALA48_RS10950 (PALA48_02174) | tmk | 2273021..2273653 (+) | 633 | WP_003091125.1 | dTMP kinase | - |
| PALA48_RS10955 (PALA48_02175) | - | 2273646..2274632 (+) | 987 | WP_003104126.1 | DNA polymerase III subunit delta' | - |
| PALA48_RS10960 (PALA48_02176) | pilZ | 2274666..2275022 (+) | 357 | WP_003091119.1 | PilZ domain-containing protein | Machinery gene |
| PALA48_RS10965 (PALA48_02177) | - | 2275037..2275813 (+) | 777 | WP_012613908.1 | TatD family hydrolase | - |
| PALA48_RS10970 (PALA48_02178) | - | 2276039..2277172 (-) | 1134 | WP_012613909.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| PALA48_RS10975 (PALA48_02179) | - | 2277258..2277896 (+) | 639 | WP_003091114.1 | TetR/AcrR family transcriptional regulator | - |
| PALA48_RS10980 (PALA48_02180) | - | 2278046..2278942 (+) | 897 | WP_003091113.1 | radical SAM protein | - |
| PALA48_RS10985 (PALA48_02181) | - | 2279007..2279639 (+) | 633 | WP_003091112.1 | DUF4823 domain-containing protein | - |
Sequence
Protein
Download Length: 118 a.a. Molecular weight: 12903.98 Da Isoelectric Point: 9.9969
>NTDB_id=684567 PALA48_RS10960 WP_003091119.1 2274666..2275022(+) (pilZ) [Pseudomonas aeruginosa strain PALA48]
MSLPPNLGPRNGILSLTIKDKSVLYAAYMPFIRNGGLFIPTNKNYKLGDEVFMLLNLMEEPEKIPVAGKVVWITPKGAQG
NRAAGIGVQFNDGDNTARNKIETYLAGALKSDRPTHTM
MSLPPNLGPRNGILSLTIKDKSVLYAAYMPFIRNGGLFIPTNKNYKLGDEVFMLLNLMEEPEKIPVAGKVVWITPKGAQG
NRAAGIGVQFNDGDNTARNKIETYLAGALKSDRPTHTM
Nucleotide
Download Length: 357 bp
>NTDB_id=684567 PALA48_RS10960 WP_003091119.1 2274666..2275022(+) (pilZ) [Pseudomonas aeruginosa strain PALA48]
ATGAGTTTGCCACCCAATCTGGGGCCGCGTAACGGCATCCTGTCCTTGACCATCAAGGACAAGTCCGTGCTGTACGCCGC
CTACATGCCGTTCATCAGGAACGGCGGGCTGTTCATTCCCACCAACAAGAACTACAAGCTCGGCGACGAAGTCTTCATGC
TGCTCAACCTGATGGAAGAGCCGGAGAAGATCCCGGTGGCCGGCAAGGTCGTCTGGATCACCCCGAAGGGCGCCCAGGGC
AACCGTGCGGCTGGCATCGGCGTGCAGTTCAACGACGGTGACAACACCGCCCGCAACAAGATCGAAACCTACCTGGCCGG
GGCGCTGAAGTCGGACCGGCCGACCCACACGATGTAA
ATGAGTTTGCCACCCAATCTGGGGCCGCGTAACGGCATCCTGTCCTTGACCATCAAGGACAAGTCCGTGCTGTACGCCGC
CTACATGCCGTTCATCAGGAACGGCGGGCTGTTCATTCCCACCAACAAGAACTACAAGCTCGGCGACGAAGTCTTCATGC
TGCTCAACCTGATGGAAGAGCCGGAGAAGATCCCGGTGGCCGGCAAGGTCGTCTGGATCACCCCGAAGGGCGCCCAGGGC
AACCGTGCGGCTGGCATCGGCGTGCAGTTCAACGACGGTGACAACACCGCCCGCAACAAGATCGAAACCTACCTGGCCGG
GGCGCTGAAGTCGGACCGGCCGACCCACACGATGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilZ | Legionella pneumophila str. Paris |
49.074 |
91.525 |
0.449 |
| pilZ | Legionella pneumophila strain ERS1305867 |
49.074 |
91.525 |
0.449 |