Detailed information NTG0683592

Bioinformatically predicted

Overview

• Name: comE
• Type: Machinery gene
• Locus tag: OLL86_RS07230
• Genome accession: NZ_CP110225
• Coordinates: 1544663..1545799 (-)
• Length: 378 a.a.
• NCBI ID: WP_264779752.1
• Uniprot ID: -
• Organism: Gallibacterium anatis strain IMT49310
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1539663..1550799

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OLL86_RS07205 (OLL86_07205)	secM	1541028..1541363 (-)	336	WP_013746273.1	secA translation cis-regulator SecM	-
OLL86_RS07210 (OLL86_07210)	-	1541454..1541795 (+)	342	WP_018346997.1	DciA family protein	-
OLL86_RS07215 (OLL86_07215)	-	1541755..1542654 (-)	900	WP_052122033.1	Dam family site-specific DNA-(adenine-N6)-methyltransferase	-
OLL86_RS07220 (OLL86_07220)	aroB	1542658..1543749 (-)	1092	WP_264779751.1	3-dehydroquinate synthase	-
OLL86_RS07225 (OLL86_07225)	aroK	1543783..1544310 (-)	528	WP_013746277.1	shikimate kinase AroK	-
OLL86_RS07230 (OLL86_07230)	comE	1544663..1545799 (-)	1137	WP_264779752.1	type IV pilus secretin PilQ	Machinery gene
OLL86_RS07235 (OLL86_07235)	-	1545799..1546329 (-)	531	WP_039148153.1	hypothetical protein	-
OLL86_RS07240 (OLL86_07240)	-	1546329..1546883 (-)	555	WP_264779753.1	SbmA/BacA-like family transporter	-
OLL86_RS07245 (OLL86_07245)	-	1546873..1547547 (-)	675	WP_264779754.1	hypothetical protein	-
OLL86_RS07250 (OLL86_07250)	-	1547748..1550309 (+)	2562	WP_264779755.1	penicillin-binding protein 1A	-

Sequence

Protein

• Length: 378 a.a.
• Molecular weight: 42006.17 Da
• Isoelectric Point: 5.8621

>NTDB_id=683592 OLL86_RS07230 WP_264779752.1 1544663..1545799(-) (comE) [Gallibacterium anatis strain IMT49310]
MKKGIILVVCMMMSLSGWSKKVILDPFFTEEANIMPDLIEDKNLAPTDEFEAIAVKYIQVNELYKIFNENGNGLLSGLSG
FSVEPSNNLLLVKGDKQQIQKFKQLISQLDKPGKQIAIEARIVTINNESLNELGVRWGMFSDADNFHKVAAKFDSFGLEN
LSSHLNVNFSTSSEAASIALQVAKIHGRLLDLELKALEQENNVEIIASPHLLTSNQRKASIKQGSEIPYVIEDDTERSSR
THIEFKEAVLGLEVTPQVLHQGVISLDLVVTQNSAGASIPYGAGQVVTIDKQEVQSQVLVRDGETVVLGGIFHDLIGKGE
NKVPLLGDIPGLGKLFSSKLERHQKRELVIFITPRIIHNSQETIENYQKRKQDFMKSF

Nucleotide

• Length: 1137 bp

>NTDB_id=683592 OLL86_RS07230 WP_264779752.1 1544663..1545799(-) (comE) [Gallibacterium anatis strain IMT49310]
ATGAAGAAAGGCATAATACTGGTGGTTTGTATGATGATGTCATTGAGCGGTTGGAGCAAAAAAGTGATATTAGATCCTTT
TTTTACGGAAGAGGCGAATATAATGCCTGACTTAATAGAGGATAAAAATTTGGCTCCGACAGATGAATTTGAAGCAATTG
CTGTGAAATATATACAAGTGAATGAATTGTATAAAATTTTTAATGAAAACGGTAATGGGCTTTTGTCCGGCTTGAGCGGA
TTTAGTGTCGAACCGAGCAACAATTTATTGTTGGTGAAAGGGGATAAGCAACAGATACAAAAATTTAAACAGTTAATTTC
TCAACTGGATAAACCGGGTAAGCAGATTGCCATAGAAGCACGCATAGTGACGATTAATAATGAAAGTTTAAATGAGCTTG
GTGTTCGCTGGGGAATGTTCAGTGATGCGGATAATTTTCACAAAGTGGCAGCTAAATTTGATAGTTTTGGTTTAGAAAAT
TTAAGTTCTCACTTAAATGTTAATTTTTCAACGAGTTCGGAGGCTGCATCTATTGCATTACAGGTGGCAAAAATTCACGG
GCGGTTGCTGGATTTAGAGTTAAAAGCGTTGGAACAGGAAAATAATGTGGAAATTATTGCCAGTCCACATTTATTAACAT
CTAACCAAAGAAAGGCATCGATTAAGCAAGGCTCTGAAATTCCTTATGTTATCGAAGATGATACAGAACGCAGCAGCCGT
ACTCATATTGAATTTAAAGAGGCAGTATTGGGTTTGGAAGTGACCCCACAAGTGCTGCATCAAGGCGTGATCTCACTGGA
TTTGGTGGTAACGCAGAATTCAGCAGGTGCGAGTATTCCTTATGGTGCCGGGCAAGTGGTAACGATTGATAAACAGGAAG
TGCAATCGCAAGTGTTGGTGAGAGATGGAGAAACGGTGGTGTTGGGCGGTATTTTTCACGATCTGATCGGAAAAGGTGAA
AATAAAGTGCCGTTGTTGGGGGATATTCCCGGATTAGGTAAGTTATTCAGTAGCAAATTGGAGCGTCATCAGAAGCGTGA
ACTGGTGATTTTTATTACACCAAGAATTATTCATAATTCTCAAGAAACGATAGAAAATTATCAAAAGCGTAAACAGGATT
TTATGAAAAGCTTTTAG

Domains

Predicted by InterProScan.

• Bacterial type II/III secretion system short domain (Secretin_N) (52-115)

• Bacterial type II and III secretion system protein (Secretin) (196-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comE	Haemophilus influenzae 86-028NP	53.125	84.656	0.45
comE	Haemophilus influenzae Rd KW20	52.795	85.185	0.45
comE	Glaesserella parasuis strain SC1401	48.923	85.979	0.421
pilQ	Vibrio campbellii strain DS40M4	42.508	86.508	0.368