Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   MYA84_RS14515 Genome accession   NZ_CP095872
Coordinates   2922003..2924240 (+) Length   745 a.a.
NCBI ID   WP_034424751.1    Uniprot ID   -
Organism   Acinetobacter schindleri strain H4-3-C1     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2917003..2929240
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MYA84_RS14495 (MYA84_14450) lnt 2917722..2919284 (+) 1563 WP_004813462.1 apolipoprotein N-acyltransferase -
  MYA84_RS14500 (MYA84_14455) - 2919486..2919821 (-) 336 WP_004813465.1 hypothetical protein -
  MYA84_RS14505 (MYA84_14460) gspG 2920106..2920573 (-) 468 WP_227499334.1 type II secretion system major pseudopilin GspG -
  MYA84_RS14510 (MYA84_14465) gspF 2920662..2921867 (-) 1206 WP_004813469.1 type II secretion system inner membrane protein GspF -
  MYA84_RS14515 (MYA84_14470) priA 2922003..2924240 (+) 2238 WP_034424751.1 primosomal protein N' Machinery gene
  MYA84_RS14520 (MYA84_14475) - 2924282..2926135 (+) 1854 WP_004813472.1 cation:proton antiporter -
  MYA84_RS14525 (MYA84_14480) hslO 2926186..2927061 (+) 876 WP_004813475.1 Hsp33 family molecular chaperone HslO -
  MYA84_RS14530 (MYA84_14485) - 2927523..2927987 (+) 465 WP_004813476.1 DUF2147 domain-containing protein -
  MYA84_RS14535 (MYA84_14490) - 2928182..2928643 (+) 462 WP_004813478.1 DUF2147 domain-containing protein -

Sequence

Protein


Download         Length: 745 a.a.        Molecular weight: 84466.45 Da        Isoelectric Point: 8.6431

>NTDB_id=678966 MYA84_RS14515 WP_034424751.1 2922003..2924240(+) (priA) [Acinetobacter schindleri strain H4-3-C1]
MPHLPISDHPASTPSVYRVRVAVPVHLFDCFDYSLSAAQYQQAKVGARVAVSFGRQNLVGVIMEKLPPDTPLDSSFKLKE
ITELLDDRALIDDKVLNLLNWSAQYYQFPIGEVVQSALPTLLRQGKPYNLLARNWKLLDDQAEAKVRRSERQQEAYKILK
LHPVGTTETVLNLAGIETATLKALEKKGICECVLEPQDFSPQPVQLAQMPLTANPEQQHAIQQVLKFKNKYQAFLLDGLT
GSGKTEVYLQIMEKVLKQGKQVLVLVPEIGLTPQTISRFQSRFHCHIALLHSGLNDSKRLQAWQAAETGKASIVLGTRSA
IYTPMPNLGLIILDEEHDLSFKQQEGFRYHARDVALYRGHLQQCPVLLGSATPSIDTYALVANGKMQVLELNQRAGTALM
PKIHILDLKVAQKQHGISLHLIQEIRKRLEKKEQVLVFLNRRGYAPVLICDSCGWQAQCPNCDANFTVHRQPYQHLHCHH
CGTLHRMPDHCPSCNHTELKTLGMGTGKVEEQLNELFPDHEIIRVDRDSTSRVGSWQKIYDKIQKSEPAILLGTQMLAKG
HHFPYVTLVAILDIDSGLLSVDFRATERTAQLIVQVAGRAGRGEHKGDVYLQTLRPDHALLNTLVTDNYRAFAKQTLEQR
QIARMPPYRYAVMIRCESRDQALNTEFLQKHAAFLRQYQDLQLEIWGPIPAPMERKAGRYQSHMVLLSADRPRLHYYIRA
WWQAMLQDKPSSMKLSLDVDPQELS

Nucleotide


Download         Length: 2238 bp        

>NTDB_id=678966 MYA84_RS14515 WP_034424751.1 2922003..2924240(+) (priA) [Acinetobacter schindleri strain H4-3-C1]
ATGCCTCACTTGCCCATCTCAGATCACCCAGCCTCAACTCCTTCAGTTTATCGTGTTCGTGTTGCTGTTCCTGTTCATCT
GTTTGACTGTTTTGATTACAGTTTAAGTGCGGCACAATATCAGCAGGCTAAGGTTGGTGCGCGCGTGGCGGTGTCTTTTG
GCCGGCAGAATCTGGTTGGGGTCATTATGGAAAAGCTGCCGCCAGACACTCCACTAGATTCCAGTTTTAAACTTAAAGAG
ATTACGGAATTACTGGATGACCGGGCACTCATTGATGACAAGGTACTGAATCTGCTGAACTGGTCAGCGCAGTATTACCA
GTTCCCGATTGGTGAAGTGGTGCAAAGTGCCTTACCAACCTTATTACGTCAGGGTAAGCCCTATAACCTGCTGGCCCGGA
ACTGGAAACTGTTAGATGACCAGGCAGAAGCCAAGGTACGCCGTTCCGAGCGTCAGCAGGAAGCCTATAAAATTTTAAAA
TTGCATCCAGTCGGTACTACTGAAACTGTACTGAACCTGGCAGGGATCGAGACAGCCACCCTAAAAGCTTTAGAGAAAAA
AGGAATTTGTGAATGCGTGCTGGAACCCCAGGATTTCAGCCCGCAGCCTGTTCAACTGGCACAAATGCCGCTTACAGCCA
ATCCGGAACAGCAACATGCCATTCAGCAGGTGCTGAAATTTAAAAATAAATATCAGGCTTTTTTACTGGATGGTCTGACC
GGTAGCGGCAAAACTGAAGTTTATTTGCAGATCATGGAAAAGGTGCTGAAACAGGGAAAACAGGTTTTAGTGCTGGTACC
GGAAATTGGCCTGACGCCACAAACCATTAGCCGGTTCCAGTCACGTTTCCATTGTCATATTGCCTTGTTACATTCTGGTT
TAAATGACTCGAAACGTCTGCAAGCCTGGCAAGCCGCAGAAACCGGTAAAGCCTCGATTGTGCTGGGTACCCGTTCTGCC
ATTTATACCCCGATGCCCAATCTAGGATTGATCATCCTGGATGAGGAACATGATCTGTCTTTTAAACAGCAGGAAGGCTT
CCGTTATCATGCCCGAGATGTTGCGCTTTATCGCGGGCATTTACAGCAATGTCCGGTGCTTCTGGGCTCTGCCACACCCA
GCATCGATACCTATGCACTGGTTGCCAATGGCAAAATGCAGGTACTGGAACTCAACCAGCGTGCTGGTACAGCCTTAATG
CCAAAGATTCATATTTTAGATTTAAAGGTGGCACAGAAACAACATGGCATCAGCCTGCATCTGATTCAGGAGATACGCAA
ACGTCTGGAAAAAAAAGAACAGGTACTGGTGTTCCTGAACCGCCGTGGTTATGCACCCGTTTTGATTTGTGACAGCTGTG
GCTGGCAGGCACAGTGTCCAAACTGTGATGCCAATTTCACTGTACACCGTCAGCCATATCAACATTTGCATTGTCACCAT
TGTGGCACCCTGCACCGTATGCCGGATCATTGTCCAAGCTGCAATCATACTGAACTCAAAACACTCGGCATGGGAACCGG
CAAGGTCGAAGAGCAATTGAATGAACTCTTTCCCGATCATGAAATCATTCGGGTAGATCGTGACTCTACCAGCCGGGTCG
GTAGCTGGCAGAAAATCTATGACAAGATTCAGAAAAGCGAGCCGGCGATTTTACTCGGTACGCAAATGCTGGCCAAAGGT
CACCATTTCCCCTATGTCACACTGGTCGCTATTTTAGATATTGATTCTGGTCTGCTCAGTGTAGACTTCCGTGCCACCGA
ACGCACTGCCCAACTGATTGTACAGGTGGCTGGTCGTGCCGGTCGTGGCGAGCACAAGGGTGATGTCTATCTACAGACCT
TACGTCCTGATCATGCTTTGCTAAATACCTTGGTGACAGATAATTACCGGGCTTTTGCTAAACAGACCTTAGAGCAGCGT
CAGATTGCCCGCATGCCACCCTATCGCTATGCAGTGATGATCCGTTGCGAATCACGTGATCAGGCATTAAATACAGAGTT
CTTACAGAAACATGCTGCCTTCTTAAGGCAGTATCAGGACCTGCAACTGGAGATCTGGGGACCTATTCCCGCACCAATGG
AACGCAAGGCGGGCCGTTACCAATCACATATGGTACTACTGTCTGCAGACCGTCCACGTTTGCACTATTATATCAGGGCA
TGGTGGCAAGCCATGCTGCAAGACAAGCCTTCCTCAATGAAGTTAAGCCTGGATGTCGATCCACAAGAGCTGAGCTAA

Domains

Predicted by InterproScan.

Type III restriction enzyme, res subunit (ResIII)

(214-374)

3DNA-binding domain (3BD) (PriA_3primeBD)

(20-119)

Primosomal protein N C-terminal domain (PriA_C)

(647-741)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

71.003

99.06

0.703