Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   OG317_RS20920 Genome accession   NZ_CP108612
Coordinates   4718817..4719941 (-) Length   374 a.a.
NCBI ID   WP_313944917.1    Uniprot ID   A0ACC6PYI5
Organism   Streptomyces sp. NBC_01167     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 4713817..4724941
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG317_RS20895 (OG317_20895) cseB 4714205..4714912 (-) 708 WP_327681658.1 two-component system response regulator CseB -
  OG317_RS20900 (OG317_20900) - 4714922..4715593 (-) 672 WP_405571713.1 hypothetical protein -
  OG317_RS20905 (OG317_20905) - 4715581..4716186 (-) 606 WP_340474520.1 SigE family RNA polymerase sigma factor -
  OG317_RS20910 (OG317_20910) - 4716371..4717276 (-) 906 WP_340474521.1 A/G-specific adenine glycosylase -
  OG317_RS20915 (OG317_20915) - 4717888..4718715 (+) 828 WP_405571716.1 hypothetical protein -
  OG317_RS20920 (OG317_20920) disA 4718817..4719941 (-) 1125 WP_313944917.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG317_RS20925 (OG317_20925) radA/sms 4719986..4721440 (-) 1455 WP_340474523.1 DNA repair protein RadA Machinery gene
  OG317_RS20930 (OG317_20930) - 4721675..4723330 (+) 1656 WP_405571721.1 BACON domain-containing protein -

Sequence

Protein


Download         Length: 374 a.a.        Molecular weight: 40387.25 Da        Isoelectric Point: 4.8731

>NTDB_id=663952 OG317_RS20920 WP_313944917.1 4718817..4719941(-) (disA) [Streptomyces sp. NBC_01167]
MAANDRAAAPGKSGGGSGNEALIRAALSAVAPGQALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDITKILRAGVQLVPDASIPTEETGTRHRTADRVSRQCGFPVVSVSQSMRLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALFELDSLTHTELLELPIVARALGYSGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=663952 OG317_RS20920 WP_313944917.1 4718817..4719941(-) (disA) [Streptomyces sp. NBC_01167]
GTGGCAGCCAACGACCGGGCAGCAGCACCCGGAAAGTCCGGCGGAGGCTCCGGCAACGAAGCACTGATCCGCGCCGCCCT
GAGCGCGGTGGCGCCCGGCCAGGCCCTGCGCGACGGCCTGGAGCGGATCCTCCGCGGCAACACCGGCGGCCTGATCGTCC
TCGGCATGGACAAAACGGTCGAATCGATGTGCACCGGCGGCTTTGTGCTGGATGTCGAGTTCACCGCGACCCGGCTGCGC
GAGCTGTGCAAGCTGGACGGCGCGCTGATCCTCGACAAGGACATCACCAAGATCCTCCGGGCCGGTGTGCAGCTGGTCCC
GGACGCGTCCATCCCCACCGAGGAGACCGGCACCCGCCACCGCACGGCGGACCGGGTGTCGCGCCAGTGCGGCTTCCCCG
TCGTGTCCGTGTCGCAGTCCATGCGTCTCATCGCGCTGTACGTGGACGGGGAGCGCCGGGTCCTGGAGGAGTCGGCCGCG
ATCCTGTCCCGCGCGAACCAGGCCCTCGCAACCCTGGAGCGCTACAAGCTCCGCCTCGACGAGGTCGCGGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTCACGGCCGTGGCCCAGCGCCTGGAGATGGTGCGCCGGATCG
CCACCGAGATCGCCGAGTACGTGGTCGAGTTGGGCACCGACGGACGGCTGCTCTCCCTCCAGCTCGACGAGTTGATCGCG
GGCGTCGAGCCCGAGCGCGAACTGGTCGTGCGTGACTATGTGCCCGAGCCCACCGCGAAGCGGTCCCGTACGGTCGACGA
GGCCCTCTTCGAGCTTGACTCCCTGACCCACACAGAACTACTGGAACTACCCATAGTGGCGAGGGCATTGGGCTACAGCG
GCTCGCCCGAGACCCTCGACTCCGCGGTCTCCCCGCGCGGCTACCGACTGCTGGCGAAGGTGCCGAGGCTGCCGGGCGCG
ATCATCGAGCGGCTGGTGGAGCACTTCGGCGGGCTGCAGAAGCTGCTCGCGGCGAGCGTCGACGATCTTCAGACGGTCGA
CGGCGTGGGCGAGGCACGCGCACGCAGCGTCCGCGAGGGCCTGTCGCGGCTCGCGGAGTCCTCGATCCTCGAGCGGTACG
TCTAG

Domains

Predicted by InterProScan.

Helix-hairpin-helix motif (HHH_2)

(324-359)

DisA bacterial checkpoint controller linker region (DisA-linker)

(155-297)

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(38-151)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.429

96.524

0.438