Detailed information NTG0660441

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: MK848_RS11435
• Genome accession: NZ_CP092824
• Coordinates: 2237964..2239109 (+)
• Length: 381 a.a.
• NCBI ID: WP_029318693.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain S1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2232964..2244109

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MK848_RS11415 (MK848_11405)	albF	2232980..2234260 (+)	1281	WP_029318696.1	pitrilysin family protein	-
MK848_RS11420 (MK848_11410)	albG	2234257..2234958 (+)	702	WP_029318695.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
MK848_RS11425 (MK848_11415)	ywhL	2234964..2236340 (-)	1377	WP_101172255.1	YncE family protein	-
MK848_RS11430 (MK848_11420)	ywhK	2236379..2237734 (-)	1356	WP_015250986.1	YncE family protein	-
MK848_RS11435 (MK848_11425)	rapF	2237964..2239109 (+)	1146	WP_029318693.1	response regulator aspartate phosphatase RapF	Regulator
MK848_RS11440 (MK848_11430)	phrF	2239093..2239212 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
MK848_RS11445 (MK848_11435)	-	2239439..2239915 (+)	477	WP_015384936.1	hypothetical protein	-
MK848_RS11450 (MK848_11440)	-	2240175..2240861 (+)	687	WP_241495663.1	hypothetical protein	-
MK848_RS11455 (MK848_11445)	-	2242337..2242984 (+)	648	WP_029318689.1	ABC transporter ATP-binding protein	-
MK848_RS11460 (MK848_11450)	-	2242977..2243540 (+)	564	WP_015483840.1	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45594.05 Da
• Isoelectric Point: 5.0624

>NTDB_id=660441 MK848_RS11435 WP_029318693.1 2237964..2239109(+) (rapF) [Bacillus subtilis strain S1]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAVSHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AITYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=660441 MK848_RS11435 WP_029318693.1 2237964..2239109(+) (rapF) [Bacillus subtilis strain S1]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGATCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCGTCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATAACATATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	98.95	100	0.99
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572