Detailed information NTG0660071

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: AVAEIV_RS07625
• Genome accession: NZ_CP092752
• Coordinates: 1589961..1592171 (+)
• Length: 736 a.a.
• NCBI ID: WP_156483617.1
• Uniprot ID: -
• Organism: Azotobacter vinelandii strain AEIV
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1584961..1597171

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AVAEIV_RS07600 (AVAEIV_001518)	-	1585115..1585837 (-)	723	WP_012700103.1	glycerophosphodiester phosphodiesterase	-
AVAEIV_RS07605 (AVAEIV_001519)	-	1586085..1587335 (+)	1251	WP_012700104.1	lipoprotein-releasing ABC transporter permease subunit	-
AVAEIV_RS07610 (AVAEIV_001520)	lolD	1587328..1588026 (+)	699	WP_061288828.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
AVAEIV_RS07615 (AVAEIV_001521)	-	1588029..1589273 (+)	1245	WP_302228520.1	lipoprotein-releasing ABC transporter permease subunit	-
AVAEIV_RS07620 (AVAEIV_001522)	-	1589298..1589825 (-)	528	WP_012700107.1	DUF2062 domain-containing protein	-
AVAEIV_RS07625 (AVAEIV_001523)	comA	1589961..1592171 (+)	2211	WP_156483617.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
AVAEIV_RS07630 (AVAEIV_001524)	-	1592243..1592875 (+)	633	WP_302228521.1	MotA/TolQ/ExbB proton channel family protein	-
AVAEIV_RS07635 (AVAEIV_001525)	-	1592872..1593300 (+)	429	WP_012700110.1	ExbD/TolR family protein	-
AVAEIV_RS07640 (AVAEIV_001526)	lpxK	1593300..1594301 (+)	1002	WP_302228522.1	tetraacyldisaccharide 4'-kinase	-
AVAEIV_RS07645 (AVAEIV_001527)	-	1594362..1594547 (+)	186	WP_012700112.1	Trm112 family protein	-
AVAEIV_RS07650 (AVAEIV_001528)	kdsB	1594544..1595308 (+)	765	WP_302228523.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
AVAEIV_RS07655 (AVAEIV_001529)	-	1595308..1595772 (+)	465	WP_012700114.1	low molecular weight protein-tyrosine-phosphatase	-
AVAEIV_RS07660 (AVAEIV_001530)	murB	1595769..1596788 (+)	1020	WP_012700115.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 736 a.a.
• Molecular weight: 79919.77 Da
• Isoelectric Point: 10.2397

>NTDB_id=660071 AVAEIV_RS07625 WP_156483617.1 1589961..1592171(+) (comA) [Azotobacter vinelandii strain AEIV]
MLALTAGLLVLRFLPALPPWWLWSPMALGAAILLAARRYSPALFLFGLGWACLSAHWALEERLPVELDGRTLWLEGLVVG
LPARIDGTLHFQLEEASSRRAELPGRLRLAWHAGPEVRAGERWRLAVSLKRPRGLVNPQGFDYEAWLLAQRIGATGTVKA
GERLGTPENADGWRDSLRQRLLQVDAHGREGALAALVMGDASGLSVADWKLLQDTGTVHLMVISGQHVGLLAGLVYGLVV
LLARFGLWPGFLPWLPCACGLAFATALGYGWLAGFGVPVQRACAMLAVVLFWRLRFRHLGLWLPILLALDGVLLLEPLAS
LQPGFWLSFGAVVILVLAFGGRLGAWSWRQTLWRAQWTSALGLLPLLLALGLPISLSGPLANLVAVPWVGFAVVPLALLG
TLLLPLPAMGEGLLWLAGALLETLFRLLGEIAGAVPAWLPHAVPVWGWLLALLGTLLILLPAGVPLRVPGLALLLPLAFP
PQERIPQARADVWLLDVGQGLAVLVRTRGHDLLYDAGPRFGDFDLGERVVLPSLRNLGVGRLDRLLLSHADGDHAGGALA
VRRALPVGEVVAGEAQAQSAALAAQPCARRAWQWDGVRFATWHWTAVQEGNRASCVLLVEAAGERLLLTGDIDAAAERAL
LDSHPEWRADWLLAPHHGSRSSSSPALLKALAPRAVLISRGWNNGFGHPHAQVVERYRKLPAVIHDTARQGALRFRLGDW
GRARGLREEPRFWREK

Nucleotide

• Length: 2211 bp

>NTDB_id=660071 AVAEIV_RS07625 WP_156483617.1 1589961..1592171(+) (comA) [Azotobacter vinelandii strain AEIV]
ATGTTGGCGCTCACCGCAGGTCTGCTCGTCCTGCGTTTCCTTCCGGCCCTACCGCCCTGGTGGCTGTGGTCGCCGATGGC
GCTGGGCGCTGCGATCCTTCTGGCGGCGCGTCGCTATTCGCCGGCGCTCTTTCTCTTCGGTCTCGGCTGGGCCTGCCTGT
CGGCGCACTGGGCGCTGGAGGAACGGTTGCCTGTCGAACTCGATGGTCGCACCCTGTGGCTGGAGGGGCTGGTGGTCGGT
CTGCCGGCGCGCATCGACGGCACGCTGCATTTCCAACTGGAGGAGGCCTCTTCCCGGCGCGCCGAACTGCCCGGGCGACT
GCGCCTGGCGTGGCACGCCGGGCCGGAGGTCCGCGCCGGGGAGCGCTGGCGCCTGGCGGTCAGCCTCAAGCGTCCGCGCG
GCCTGGTCAACCCGCAGGGTTTCGATTACGAGGCCTGGCTGCTGGCCCAGCGGATCGGCGCCACCGGGACGGTGAAAGCG
GGAGAGCGACTCGGAACGCCGGAAAACGCCGACGGTTGGCGCGATTCCCTGCGCCAGCGCCTGCTGCAGGTCGATGCCCA
TGGCCGTGAGGGCGCGCTCGCCGCGCTGGTGATGGGCGACGCGTCCGGGCTGAGCGTGGCGGACTGGAAGCTCCTGCAGG
ATACCGGCACCGTGCATCTGATGGTGATCTCCGGCCAGCATGTCGGCCTGCTTGCCGGCCTGGTCTACGGGCTGGTGGTC
CTGCTGGCGAGATTTGGCCTGTGGCCGGGTTTTCTGCCTTGGTTGCCCTGTGCCTGCGGCCTGGCCTTCGCCACCGCGCT
CGGTTATGGCTGGCTGGCCGGCTTCGGGGTACCAGTACAGCGGGCCTGCGCCATGCTCGCCGTGGTGCTGTTCTGGCGCC
TGCGTTTCCGCCACCTGGGTCTCTGGCTACCCATCCTGCTGGCGCTGGACGGCGTACTGCTGCTCGAGCCCCTGGCCAGC
CTGCAGCCGGGGTTCTGGCTGTCGTTCGGTGCGGTGGTGATCCTCGTCCTGGCCTTCGGCGGCCGGCTGGGTGCCTGGTC
GTGGCGGCAGACCCTGTGGCGAGCGCAGTGGACCAGTGCGCTGGGACTGCTACCGTTGTTGCTGGCCTTGGGCCTGCCGA
TCAGTCTCAGCGGTCCGTTGGCCAATCTGGTCGCGGTACCCTGGGTCGGTTTCGCGGTGGTCCCGCTGGCTCTGCTCGGA
ACCCTGCTGCTGCCCTTGCCGGCAATGGGCGAGGGCCTTCTCTGGCTGGCCGGCGCCTTGCTGGAGACGCTGTTTCGGCT
GCTCGGCGAGATCGCCGGCGCCGTACCGGCCTGGCTGCCCCACGCGGTGCCGGTCTGGGGCTGGCTGCTGGCGCTGCTCG
GGACCCTGCTGATCCTGCTGCCGGCGGGAGTGCCGCTGCGTGTCCCGGGACTGGCGCTGCTGCTGCCCCTGGCATTTCCG
CCGCAGGAGCGAATCCCGCAGGCACGGGCCGATGTCTGGCTGCTGGATGTCGGGCAGGGCCTTGCCGTGCTTGTGCGTAC
CCGCGGGCACGACCTGCTCTATGATGCGGGGCCGCGTTTCGGCGATTTCGATCTGGGCGAGCGCGTGGTCCTGCCTTCGC
TGCGCAATCTCGGCGTGGGCCGCCTGGATCGCCTGCTGCTCAGCCATGCCGATGGCGACCACGCCGGTGGCGCCCTGGCC
GTGCGGCGCGCTCTGCCGGTGGGCGAGGTCGTCGCCGGCGAGGCGCAGGCGCAATCGGCGGCGCTCGCCGCGCAGCCTTG
CGCCCGTCGCGCCTGGCAGTGGGATGGTGTGCGTTTTGCCACCTGGCACTGGACGGCCGTGCAAGAGGGCAATCGGGCTT
CCTGCGTGCTGCTGGTCGAGGCCGCCGGCGAGCGCCTGCTGCTGACCGGCGATATCGATGCCGCAGCCGAGCGGGCACTG
CTCGACAGCCACCCGGAGTGGCGCGCCGACTGGCTGCTGGCGCCTCACCACGGCAGCCGCAGTTCGTCTTCGCCGGCTCT
GCTCAAGGCCCTGGCGCCGCGCGCGGTGCTGATCTCGCGCGGCTGGAACAACGGCTTCGGCCATCCCCATGCGCAGGTCG
TGGAGCGTTACCGGAAGCTGCCGGCCGTGATTCACGATACTGCGCGCCAGGGGGCCCTGCGGTTTCGCCTGGGCGACTGG
GGCCGGGCGCGCGGGCTGCGCGAAGAGCCCCGCTTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (196-461)

• Domain of unknown function (DUF4131) (DUF4131) (18-163)

• Metallo-beta-lactamase superfamily (Lactamase_B) (496-678)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	65.912	96.06	0.633
comA	Ralstonia pseudosolanacearum GMI1000	34.814	100	0.394