Detailed information NTG0659313

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: MKD32_RS19075
• Genome accession: NZ_CP092630
• Coordinates: 4347902..4349428 (+)
• Length: 508 a.a.
• NCBI ID: WP_240292623.1
• Uniprot ID: -
• Organism: Shewanella xiamenensis strain CQ-Y1
• Function: require for natural transformation (predicted from homology) Unclear

Genomic Context

Location: 4342902..4354428

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MKD32_RS19050 (MKD32_19050)	-	4342966..4343916 (+)	951	WP_069453779.1	calcium/sodium antiporter	-
MKD32_RS19055 (MKD32_19055)	-	4344100..4344804 (+)	705	WP_240292621.1	hypothetical protein	-
MKD32_RS19060 (MKD32_19060)	-	4344889..4345968 (+)	1080	WP_240292622.1	sensor histidine kinase	-
MKD32_RS19065 (MKD32_19065)	-	4345968..4346564 (+)	597	WP_037413708.1	response regulator transcription factor	-
MKD32_RS19070 (MKD32_19070)	-	4346570..4347685 (-)	1116	WP_240293529.1	DUF1963 domain-containing protein	-
MKD32_RS19075 (MKD32_19075)	comM	4347902..4349428 (+)	1527	WP_240292623.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
MKD32_RS19080 (MKD32_19080)	-	4349529..4350431 (+)	903	WP_037413712.1	acyltransferase	-
MKD32_RS19085 (MKD32_19085)	-	4350439..4351380 (+)	942	WP_037431237.1	acyltransferase	-
MKD32_RS19090 (MKD32_19090)	-	4351449..4351913 (-)	465	WP_240292624.1	DUF523 domain-containing protein	-
MKD32_RS19095 (MKD32_19095)	-	4352246..4353034 (+)	789	WP_240292625.1	GntR family transcriptional regulator	-
MKD32_RS19100 (MKD32_19100)	prpB	4353099..4353977 (+)	879	WP_037413719.1	methylisocitrate lyase	-

Sequence

Protein

• Length: 508 a.a.
• Molecular weight: 55326.75 Da
• Isoelectric Point: 7.5609

>NTDB_id=659313 MKD32_RS19075 WP_240292623.1 4347902..4349428(+) (comM) [Shewanella xiamenensis strain CQ-Y1]
MAIACVHTRASCGVEAPEVTVEVHLSNGLPAFNLVGLPEASVKEARERVRSALINAGFEFPMRRITVNLAPADLPKQGGR
YDLPIAIGILAASEQIPHSSLKDTEFVGELALSGQIRYCQGLLPAIIAAKHHNNQLILPLDNRHDAELVGYPKVYFGSHL
QSLAAFLHGQAPLPMLEQQLEWISDEPAQSTPCLSEVIGQYQAKQALEIAAAGNHNLLMLGPPGTGKTMLASRMMALLPA
LNYEEALEVAAIHSVAGINIKPEDFLKRPFRAPHHTCSSISLVGGGSIPKPGEISLAHRGVLFLDEVAEFPRKVLDCLRE
PMETGEVVISRAAAKLTFLSRFQLIAAMNPSPSGDIDGPNRATPDQIQRYLARLSGPFIDRFDLTIEVPKLPAGTLTQQS
TQGETSHQIAKRVKCARDIQLARAGVLNSELSGKQLKQFSGINEADLVFLEQSVVKLGLSVRSFHRIQRVARTIADLEQA
PNTERRHLAQALGYRAMDKLLARLSQQY

Nucleotide

• Length: 1527 bp

>NTDB_id=659313 MKD32_RS19075 WP_240292623.1 4347902..4349428(+) (comM) [Shewanella xiamenensis strain CQ-Y1]
ATGGCGATAGCCTGCGTACATACCCGAGCCAGTTGTGGGGTTGAAGCACCCGAAGTCACGGTTGAAGTGCATCTCAGTAA
TGGCCTACCGGCTTTTAATCTGGTGGGTTTGCCAGAAGCCTCTGTCAAAGAAGCCCGCGAGCGGGTACGCAGCGCCTTGA
TCAATGCGGGGTTCGAGTTTCCGATGCGGCGGATAACCGTCAACCTCGCCCCTGCAGATTTACCCAAGCAAGGTGGCCGT
TACGATTTACCTATCGCCATCGGCATTCTAGCGGCTTCAGAGCAAATCCCCCACTCTAGCCTTAAGGATACCGAATTTGT
TGGCGAACTTGCCCTCTCAGGGCAAATCCGCTACTGCCAAGGATTGCTACCAGCAATCATTGCGGCTAAACACCATAATA
ATCAGTTAATTCTGCCACTCGATAATCGCCACGATGCCGAATTAGTTGGCTATCCTAAGGTCTACTTTGGCTCCCATTTG
CAAAGTTTAGCCGCGTTTCTCCATGGACAAGCGCCACTTCCCATGCTGGAGCAGCAGCTCGAATGGATCTCGGATGAGCC
GGCGCAGTCCACGCCTTGCCTTAGCGAGGTGATAGGTCAATACCAAGCTAAACAAGCGCTTGAGATCGCCGCTGCAGGCA
ACCATAACCTATTAATGCTAGGCCCACCGGGTACTGGCAAAACCATGTTAGCCAGCCGCATGATGGCGCTATTACCTGCT
CTCAATTATGAAGAAGCCTTAGAAGTGGCTGCAATTCATTCCGTCGCGGGCATCAATATCAAACCTGAGGACTTTCTTAA
GCGACCATTTCGCGCGCCGCACCATACTTGCTCCTCAATTTCCTTAGTCGGTGGTGGCAGCATTCCTAAGCCTGGCGAAA
TTTCATTGGCCCATCGCGGAGTATTATTTCTGGATGAAGTCGCTGAATTTCCAAGAAAAGTGCTCGACTGTTTGCGTGAA
CCGATGGAAACAGGTGAAGTGGTGATCTCCCGCGCGGCGGCAAAACTGACCTTTTTAAGTCGCTTTCAATTGATCGCCGC
CATGAATCCCAGCCCGAGTGGCGATATCGACGGCCCCAATCGAGCCACACCCGATCAAATCCAGCGCTATCTCGCCAGGC
TCTCTGGCCCGTTTATAGATAGATTTGATCTCACCATCGAAGTCCCCAAACTCCCAGCAGGCACCCTAACGCAACAGTCG
ACGCAAGGCGAAACCAGCCATCAAATCGCCAAACGAGTAAAATGCGCCCGCGATATTCAACTCGCCAGAGCGGGCGTGCT
TAACAGCGAACTATCAGGTAAACAACTTAAGCAATTTAGTGGTATCAATGAGGCTGACCTAGTTTTTTTAGAACAGAGTG
TCGTCAAGTTAGGATTATCCGTGCGCAGCTTTCATCGCATTCAACGGGTTGCCCGCACCATTGCCGACCTTGAGCAGGCC
CCCAATACCGAAAGGCGCCACCTCGCCCAAGCCTTAGGATATCGGGCTATGGATAAATTATTGGCCCGTTTATCCCAACA
GTATTGA

Domains

Predicted by InterproScan.

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (194-393)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (403-495)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Haemophilus influenzae Rd KW20	56.607	99.803	0.565
comM	Vibrio cholerae strain A1552	56.102	100	0.561
comM	Glaesserella parasuis strain SC1401	55.336	99.606	0.551
comM	Vibrio campbellii strain DS40M4	54.921	100	0.549
comM	Legionella pneumophila str. Paris	46.967	100	0.472
comM	Legionella pneumophila strain ERS1305867	46.967	100	0.472
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	43.738	99.016	0.433