Detailed information NTG0657216

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG816_RS13815
• Genome accession: NZ_CP108244
• Coordinates: 2948374..2949660 (-)
• Length: 428 a.a.
• NCBI ID: WP_030297265.1
• Uniprot ID: A0ABN0VAM4
• Organism: Streptomyces sp. NBC_00073
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2943374..2954660

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG816_RS13805 (OG816_13795)	-	2944578..2947199 (-)	2622	WP_327283421.1	valine--tRNA ligase	-
OG816_RS13810 (OG816_13800)	-	2947329..2948261 (+)	933	WP_328762748.1	hypothetical protein	-
OG816_RS13815 (OG816_13805)	clpX	2948374..2949660 (-)	1287	WP_030297265.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG816_RS13820 (OG816_13810)	clpP	2949814..2950485 (-)	672	WP_323179072.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG816_RS13825 (OG816_13815)	clpP	2950572..2951189 (-)	618	WP_327283423.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG816_RS13830 (OG816_13820)	tig	2951522..2952904 (-)	1383	WP_327283424.1	trigger factor	-
OG816_RS13845 (OG816_13835)	-	2953498..2953997 (+)	500	Protein_2741	replication initiator	-
OG816_RS13850 (OG816_13840)	-	2953990..2954190 (+)	201	WP_405756064.1	excisionase family DNA-binding protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46909.81 Da
• Isoelectric Point: 4.7271

>NTDB_id=657216 OG816_RS13815 WP_030297265.1 2948374..2949660(-) (clpX) [Streptomyces sp. NBC_00073]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLESYVVGQEP
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
ADVVRSNVNPTLVPRIVPKDQGPQEKSA

Nucleotide

• Length: 1287 bp

>NTDB_id=657216 OG816_RS13815 WP_030297265.1 2948374..2949660(-) (clpX) [Streptomyces sp. NBC_00073]
GTGGCACGCATCGGTGACGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGACCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAGGAGCTCGCGGAGACCT
CCGAGGTCCGGTGGGAGGAACTCCCCAAGCCTCGCGAGATCTACGAGTTCCTGGAGAGCTACGTCGTCGGCCAGGAGCCG
GCGAAGAAGGCGCTCTCGGTGGCGGTCTACAACCACTACAAGCGCGTCCAGGCCGGCGAGAACGGCGGCGCGCAGGGCCG
TGACGACGCGATCGAGCTCGCGAAGTCCAACATCCTGCTGCTGGGCCCGACGGGCTCCGGCAAGACGCTGCTCGCCCAAA
CGCTCGCGCGCATGCTCAACGTCCCGTTCGCCATCGCTGACGCGACGGCGCTGACGGAGGCCGGGTACGTGGGCGAGGAC
GTCGAGAACATCCTGCTCAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACGCGCGACGTGAGCGGTGAGGGCGTGCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACGACGGCTTCGGTCCCGCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTCTTCATCGTGGGCGGCGCCTTCGCCGGCCTGGAGAAGATCATCGAGTCGCGTGCGGGCGC
CAAGGGCATCGGCTTCGGGGCGACGATCCGCTCGAAGCGCGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCGGAGTTCATCGGCCGTCTGCCCGTCATCACTTCGGTGCACAACCTGGACCGC
GAGGCGCTGCTGCAGATCCTGGTGGAGCCGCGGAACGCGCTGGTGAAGCAGTACCAGCGGCTGTTCGAACTCGACGGCGT
CGAGCTGGACTTCGAGCGCGAGGCGCTGGAGGCCATCGCGGACCAGGCGATCCTCCGCCAGACGGGCGCGCGCGGCCTGC
GCGCCATCATGGAAGAGGTCCTGATGTCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTGGTCATCACG
GCGGACGTCGTCCGCTCGAACGTCAACCCGACGCTGGTCCCGCGCATCGTCCCGAAGGACCAGGGCCCGCAGGAGAAGTC
GGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	93.925	0.598
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.015	96.028	0.519