Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG420_RS20945 Genome accession   NZ_CP108147
Coordinates   4602114..4603172 (+) Length   352 a.a.
NCBI ID   WP_328834341.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00169     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4597114..4608172
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG420_RS20930 (OG420_20905) - 4597810..4598667 (+) 858 WP_328933568.1 hypothetical protein -
  OG420_RS20935 (OG420_20910) - 4598671..4600365 (-) 1695 WP_405880116.1 BACON domain-containing protein -
  OG420_RS20940 (OG420_20915) radA/sms 4600567..4601976 (+) 1410 WP_266769766.1 DNA repair protein RadA Machinery gene
  OG420_RS20945 (OG420_20920) disA 4602114..4603172 (+) 1059 WP_328834341.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG420_RS20950 (OG420_20925) - 4603217..4604047 (-) 831 WP_328933566.1 hypothetical protein -
  OG420_RS20955 (OG420_20930) - 4604430..4605371 (+) 942 WP_328933565.1 A/G-specific adenine glycosylase -
  OG420_RS20960 (OG420_20935) - 4605672..4606211 (+) 540 WP_019064956.1 SigE family RNA polymerase sigma factor -
  OG420_RS20965 (OG420_20940) - 4606199..4606888 (+) 690 WP_405880119.1 hypothetical protein -
  OG420_RS20970 (OG420_20945) cseB 4607034..4607741 (+) 708 WP_328830754.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 352 a.a.        Molecular weight: 38034.67 Da        Isoelectric Point: 4.7751

>NTDB_id=654978 OG420_RS20945 WP_328834341.1 4602114..4603172(+) (disA) [Streptomyces sp. NBC_00169]
MRASLSAVAPGTALRDGLERILRGNTGGLIVLGSDKTVEAMCTGGFILDVEFTATRLRELCKLDGGIVVSSDLSKILRAG
VQLVPDPDIPTEETGTRHRTADRVSKQVAFPVVSVSQSMRLIALYVDGQRRVLEDSAAILSRANQALATLERYKLRLDEV
AGTLSALEIEDLVTVRDVSAVVQRLEMVRLIATEIAEYVVELGTDGRLLALQLEELIAGVEPERELVVRDYVPEPTAKRS
RTVDEALAELDALSHAELLELPTVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGAIIDRLVEHFGGLQKLLAASVDD
LQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1059 bp        

>NTDB_id=654978 OG420_RS20945 WP_328834341.1 4602114..4603172(+) (disA) [Streptomyces sp. NBC_00169]
ATGCGCGCCTCACTGAGCGCCGTGGCCCCCGGCACGGCGTTGCGCGACGGCCTGGAGCGCATCCTCCGCGGCAACACGGG
CGGCCTCATCGTGCTCGGTTCCGACAAGACCGTCGAAGCGATGTGCACGGGCGGCTTCATCCTGGACGTCGAGTTCACGG
CCACGCGCCTGCGCGAACTGTGCAAGCTCGACGGCGGCATCGTGGTGTCGTCCGATCTCTCCAAGATCCTCCGGGCGGGT
GTCCAGCTGGTCCCCGACCCGGACATCCCCACCGAGGAGACCGGCACCCGCCACCGCACGGCGGACCGCGTCAGCAAACA
GGTCGCCTTCCCGGTGGTCTCGGTCTCCCAGTCGATGCGCCTGATCGCCCTCTACGTGGACGGCCAGCGACGCGTCCTGG
AGGACTCGGCGGCGATCCTGTCCCGCGCCAACCAGGCCCTGGCGACGCTGGAGCGGTACAAGCTCCGGCTGGACGAGGTG
GCGGGAACGTTGTCAGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTCTCCGCGGTGGTCCAGCGGCTGGAGAT
GGTCCGGCTGATCGCCACCGAAATCGCCGAGTACGTAGTGGAGTTGGGCACGGACGGCCGCCTGCTCGCCCTCCAGCTGG
AGGAGTTGATCGCGGGCGTGGAGCCGGAGCGCGAACTCGTCGTACGCGACTACGTCCCCGAGCCCACGGCCAAACGATCC
CGCACGGTGGACGAGGCACTCGCCGAACTCGACGCCCTCTCCCACGCGGAGCTCCTCGAACTCCCCACCGTGGCCCGCGC
GTTGGGCTACACCGGCTCCCCCGAGGCCCTCGACTCGGCGGTCTCCCCCCGCGGCTTCCGCCTGCTGGCCAAGGTCCCGC
GCCTCCCCGGCGCGATCATCGACCGCCTGGTCGAGCACTTCGGCGGCCTGCAGAAACTCCTGGCGGCAAGCGTCGACGAC
CTGCAGACGGTCGACGGCGTGGGCGAAGCGCGGGCCCGCAGCGTCCGAGAGGGCCTCTCCCGCCTGGCGGAGTCCTCGAT
CCTCGAACGCTACGTCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.665

98.295

0.449