Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG446_RS16450 Genome accession   NZ_CP108100
Coordinates   3673273..3674397 (+) Length   374 a.a.
NCBI ID   WP_114245192.1    Uniprot ID   A0ABY9IUC4
Organism   Streptomyces sp. NBC_00236     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3668273..3679397
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG446_RS16435 (OG446_16450) - 3668735..3669583 (+) 849 WP_328894755.1 hypothetical protein -
  OG446_RS16440 (OG446_16455) - 3669611..3671551 (-) 1941 WP_328894756.1 hypothetical protein -
  OG446_RS16445 (OG446_16460) radA/sms 3671736..3673148 (+) 1413 WP_148020034.1 DNA repair protein RadA Machinery gene
  OG446_RS16450 (OG446_16465) disA 3673273..3674397 (+) 1125 WP_114245192.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG446_RS16455 (OG446_16470) - 3674680..3675504 (-) 825 WP_328894757.1 hypothetical protein -
  OG446_RS16460 (OG446_16475) - 3675842..3676744 (+) 903 WP_328894758.1 A/G-specific adenine glycosylase -
  OG446_RS16465 (OG446_16480) - 3676951..3677595 (+) 645 WP_328894759.1 SigE family RNA polymerase sigma factor -
  OG446_RS16470 (OG446_16485) - 3677583..3678347 (+) 765 WP_328894760.1 hypothetical protein -
  OG446_RS16475 (OG446_16490) cseB 3678358..3679062 (+) 705 WP_328894761.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40372.27 Da        Isoelectric Point: 4.9352

>NTDB_id=653600 OG446_RS16450 WP_114245192.1 3673273..3674397(+) (disA) [Streptomyces sp. NBC_00236]
MAASDRAASPGKSGQGTGNEALMRASLTAVAPGMALRDGLERILRGNTGGLIVLGMDRTVESMCTGGFVLDVEFTATRLR
ELAKLDGALILDKDMTKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCNFPVVSVSQSMHLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELDALSHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=653600 OG446_RS16450 WP_114245192.1 3673273..3674397(+) (disA) [Streptomyces sp. NBC_00236]
GTGGCAGCCAGCGACCGGGCAGCATCGCCCGGAAAGTCCGGCCAAGGCACCGGTAACGAGGCGCTGATGCGCGCCTCGTT
GACCGCCGTCGCGCCCGGAATGGCCCTGCGGGACGGCCTGGAGCGCATCCTCCGTGGCAACACCGGCGGGCTGATCGTGC
TCGGCATGGACAGGACCGTCGAGTCGATGTGCACCGGCGGCTTCGTGCTGGACGTGGAGTTCACCGCGACCCGGCTGCGC
GAGCTCGCCAAGCTCGACGGGGCACTGATCCTCGACAAGGACATGACCAAGATCCTGCGGGCCGGCGTCCAGCTGGTCCC
GGACGCCTCGATCCCCACCGAGGAGACGGGCACCCGGCACCGCACGGCGGACCGGGTCTCCAAGCAGTGCAACTTCCCGG
TCGTCTCGGTCTCGCAGTCGATGCACCTCATCGCGCTGTACGTGGACGGGGAGCGCCGGGTCCTGGAGGAGTCCGCCGCG
ATCCTCTCCCGCGCCAACCAGGCGCTCGCCACGCTGGAGCGGTACAAGCTCCGGCTCGACGAGGTCGCGGGCACGCTCTC
CGCCCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTGACGGCGGTCGCCCAGCGGCTGGAGATGGTCCGCCGGATCG
CGACCGAGATCGCCGAGTACGTGGTGGAGCTCGGGACCGACGGCCGGCTCCTCTCGCTCCAGCTCGACGAGTTGATCGCG
GGCGTGGAGCCGGAGCGCGAGCTGGTCGTGCGCGACTACGTGCCGGAGCCGACCGCGAAGCGCTCCCGCACGGTGGCGGA
GGCGCTCACCGAGCTGGACGCGCTGTCCCACACCGAGCTGCTCGAACTCCCGGTCGTGGCAAGGGCGCTTGGCTACAGCG
GCTCCCCGGAGACGCTCGACTCGGCGGTGTCGCCGCGCGGCTTCCGGCTGCTGGCGAAGGTGCCGCGCCTGCCCGGGGCG
ATCATCGACCGGCTGGTGGAGCACTTCGGCGGCCTGCAGAAGCTGCTCGCCGCGAGCGTCGACGACCTCCAGACGGTCGA
CGGCGTCGGCGAGGCACGGGCGCGCAGCGTGCGCGAGGGCCTGTCGCGGCTGGCCGAGTCGTCGATCCTCGAACGGTACG
TGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436