Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG718_RS30975 Genome accession   NZ_CP108081
Coordinates   6953213..6954337 (-) Length   374 a.a.
NCBI ID   WP_055618634.1    Uniprot ID   A0ABZ1HHJ8
Organism   Streptomyces sp. NBC_00258     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 6948213..6959337
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG718_RS30950 (OG718_30930) cseB 6948764..6949489 (-) 726 WP_143640458.1 two-component system response regulator CseB -
  OG718_RS30955 (OG718_30935) - 6949541..6950149 (-) 609 WP_260695404.1 hypothetical protein -
  OG718_RS30960 (OG718_30940) - 6950179..6950736 (-) 558 WP_143640460.1 SigE family RNA polymerase sigma factor -
  OG718_RS30965 (OG718_30945) - 6951008..6951937 (-) 930 WP_143640461.1 A/G-specific adenine glycosylase -
  OG718_RS30970 (OG718_30950) - 6952142..6952963 (+) 822 WP_306939302.1 hypothetical protein -
  OG718_RS30975 (OG718_30955) disA 6953213..6954337 (-) 1125 WP_055618634.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG718_RS30980 (OG718_30960) radA/sms 6954408..6955817 (-) 1410 WP_143640463.1 DNA repair protein RadA Machinery gene
  OG718_RS30985 (OG718_30965) - 6956040..6957920 (+) 1881 WP_328845735.1 hypothetical protein -
  OG718_RS30990 (OG718_30970) - 6958018..6958872 (-) 855 WP_306939305.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40267.13 Da        Isoelectric Point: 4.9269

>NTDB_id=653022 OG718_RS30975 WP_055618634.1 6953213..6954337(-) (disA) [Streptomyces sp. NBC_00258]
MAANDRAAVPGKSAGSSGADGLMRTSLSAVAPGTGLRDGLERILRGNTGGLIVLGWDKTVEAMCSGGFVLDVEFTATRLR
ELCKLDGGIIVDKDITKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALFELDALTHAELLELPTVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=653022 OG718_RS30975 WP_055618634.1 6953213..6954337(-) (disA) [Streptomyces sp. NBC_00258]
GTGGCAGCCAACGACCGGGCAGCAGTTCCCGGCAAGTCCGCCGGGAGTTCCGGTGCCGATGGCCTGATGCGCACCTCACT
CAGCGCCGTGGCACCCGGCACAGGGCTGCGTGACGGCCTGGAGCGAATTCTCCGCGGCAACACCGGCGGGCTCATCGTGC
TCGGCTGGGACAAGACCGTCGAGGCGATGTGCAGCGGCGGTTTCGTGCTGGACGTGGAGTTCACGGCGACCCGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCATCGTCGACAAGGACATCACCAAGATCCTGCGGGCCGGTGTGCAGCTGGTGCC
CGACCCCACCATTCCGACGGAGGAGACCGGTACCCGTCACCGCACGGCGGACCGGGTGAGCAAGCAGGTCGGCTTCCCCG
TCGTCTCCGTCTCCCAGTCCATGCGGCTGATCGCGCTGTACGTGGACGGGCAGCGGCGGGTCCTGGAGGACTCGGCCGCG
ATCCTCTCCCGCGCGAACCAGGCCCTGGCCACGCTGGAGCGGTACAAGCTCCGCCTCGACGAGGTCGCGGGCACGTTGTC
GGCCCTCGAGATCGAGGACCTGGTCACCGTCCGGGACGTGTCGGCGGTCGCCCAGCGGCTGGAGATGGTGCGGCGCATCG
CGACCGAGATCGCCGAGTACGTGGTCGAGTTGGGCACGGACGGGCGGTTGCTCGCGCTTCAGCTGGACGAGTTGATCGCC
GGGGTCGAGCCCGAGCGGGAGCTTGTCGTGCGGGACTATGTGCCCGAGCCGACGGCCAAGCGGTCGCGGACCGTCGACGA
GGCGTTGTTCGAGCTCGACGCGCTCACCCATGCGGAGCTTCTCGAACTGCCGACGGTGGCTCGGGCGTTGGGGTACACCG
GGTCGCCCGAGGCGCTCGACTCCGCCGTTTCGCCCCGCGGGTTCCGGTTGCTGGCGAAGGTGCCGCGGTTGCCGGGGGCG
ATCATCGACCGGCTTGTCGAGCACTTCGGTGGGCTGCAGAAGCTTCTTGCCGCGAGCGTGGATGATCTGCAGACCGTGGA
TGGGGTGGGGGAGGCTCGGGCTCGTAGTGTGCGGGAGGGGCTTTCCCGGTTGGCCGAGTCTTCGATCCTCGAGCGGTACG
TGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

46.243

92.513

0.428