Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | BEST7003_RS01950 | Genome accession | NZ_AP012496 |
| Coordinates | 372151..372600 (-) | Length | 149 a.a. |
| NCBI ID | WP_003246436.1 | Uniprot ID | A0AAE2SFQ0 |
| Organism | Bacillus subtilis BEST7003 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 367151..377600
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BEST7003_RS01920 (BEST7003_0336) | yckA | 367302..367982 (-) | 681 | WP_003234624.1 | amino acid ABC transporter permease | - |
| BEST7003_RS01925 (BEST7003_0337) | yckB | 367992..368855 (-) | 864 | WP_009966510.1 | transporter substrate-binding domain-containing protein | - |
| BEST7003_RS21685 | - | 369017..369214 (+) | 198 | WP_119122841.1 | hypothetical protein | - |
| BEST7003_RS01930 (BEST7003_0339) | yckC | 369233..369688 (+) | 456 | WP_003246356.1 | RDD family protein | - |
| BEST7003_RS01935 (BEST7003_0340) | yckD | 369770..370102 (+) | 333 | WP_003246247.1 | YckD family protein | - |
| BEST7003_RS01940 (BEST7003_0341) | bglC | 370256..371689 (+) | 1434 | WP_003246242.1 | 6-phospho-beta-glucosidase | - |
| BEST7003_RS01945 (BEST7003_0342) | nin/comJ | 371726..372124 (-) | 399 | WP_003246342.1 | DNA-entry nuclease inhibitor | Regulator |
| BEST7003_RS01950 (BEST7003_0343) | nucA/comI | 372151..372600 (-) | 450 | WP_003246436.1 | DNA-entry nuclease | Machinery gene |
| BEST7003_RS01955 (BEST7003_0344) | tlpC | 372768..374489 (-) | 1722 | WP_003246498.1 | methyl-accepting chemotaxis protein TlpC | - |
| BEST7003_RS01960 (BEST7003_0345) | hxlB | 374600..375157 (-) | 558 | WP_003246343.1 | 6-phospho-3-hexuloisomerase | - |
| BEST7003_RS01965 (BEST7003_0346) | hxlA | 375163..375795 (-) | 633 | WP_003246452.1 | 3-hexulose-6-phosphate synthase | - |
| BEST7003_RS01970 (BEST7003_0347) | hxlR | 376028..376390 (+) | 363 | WP_003246265.1 | transcriptional activator HxlR | - |
Sequence
Protein
Download Length: 149 a.a. Molecular weight: 16486.48 Da Isoelectric Point: 4.6274
>NTDB_id=65215 BEST7003_RS01950 WP_003246436.1 372151..372600(-) (nucA/comI) [Bacillus subtilis BEST7003]
MNITTDIIKTILLVIVIIAAAAVGLIKGDFFSADQKTSQTKEYDETMAFPSDRYPETAKHIKDAINEGHSEVCTIDRDGA
EERREQSLKDVPSKKGYDRDEWPMAMCKEGGEGASVEYISPADNRGAGSWVGHRLTDYPDGTKVLFTIQ
MNITTDIIKTILLVIVIIAAAAVGLIKGDFFSADQKTSQTKEYDETMAFPSDRYPETAKHIKDAINEGHSEVCTIDRDGA
EERREQSLKDVPSKKGYDRDEWPMAMCKEGGEGASVEYISPADNRGAGSWVGHRLTDYPDGTKVLFTIQ
Nucleotide
Download Length: 450 bp
>NTDB_id=65215 BEST7003_RS01950 WP_003246436.1 372151..372600(-) (nucA/comI) [Bacillus subtilis BEST7003]
GTGAACATCACGACGGACATCATAAAAACGATACTTCTCGTCATCGTCATCATAGCAGCTGCAGCTGTCGGCCTGATAAA
AGGAGACTTTTTCTCAGCTGATCAAAAAACGTCTCAAACGAAAGAATATGATGAAACAATGGCCTTCCCATCTGACCGGT
ATCCCGAAACTGCCAAGCATATTAAGGATGCGATAAATGAGGGGCACTCAGAGGTGTGCACTATTGACAGAGACGGAGCT
GAAGAACGCCGCGAGCAATCATTAAAGGACGTACCTTCCAAAAAGGGGTATGACAGAGATGAATGGCCAATGGCCATGTG
CAAAGAAGGCGGTGAGGGAGCTTCTGTAGAATACATTTCTCCCGCTGACAACCGCGGAGCAGGCTCTTGGGTCGGGCATC
GGCTTACCGATTACCCAGACGGCACAAAGGTTTTATTCACAATTCAGTAA
GTGAACATCACGACGGACATCATAAAAACGATACTTCTCGTCATCGTCATCATAGCAGCTGCAGCTGTCGGCCTGATAAA
AGGAGACTTTTTCTCAGCTGATCAAAAAACGTCTCAAACGAAAGAATATGATGAAACAATGGCCTTCCCATCTGACCGGT
ATCCCGAAACTGCCAAGCATATTAAGGATGCGATAAATGAGGGGCACTCAGAGGTGTGCACTATTGACAGAGACGGAGCT
GAAGAACGCCGCGAGCAATCATTAAAGGACGTACCTTCCAAAAAGGGGTATGACAGAGATGAATGGCCAATGGCCATGTG
CAAAGAAGGCGGTGAGGGAGCTTCTGTAGAATACATTTCTCCCGCTGACAACCGCGGAGCAGGCTCTTGGGTCGGGCATC
GGCTTACCGATTACCCAGACGGCACAAAGGTTTTATTCACAATTCAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |