Detailed information NTG0651922

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: LVJ81_RS12755
• Genome accession: NZ_CP091512
• Coordinates: 2597992..2599284 (+)
• Length: 430 a.a.
• NCBI ID: WP_155970500.1
• Uniprot ID: -
• Organism: Vitreoscilla stercoraria strain SAG 1488-6
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2592992..2604284

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LVJ81_RS12740 (LVJ81_12740)	-	2594070..2594531 (-)	462	WP_019958599.1	DUF4442 domain-containing protein	-
LVJ81_RS12745 (LVJ81_12745)	-	2594695..2596053 (-)	1359	WP_019958600.1	pitrilysin family protein	-
LVJ81_RS12750 (LVJ81_12750)	-	2596050..2597384 (-)	1335	WP_019958601.1	pitrilysin family protein	-
LVJ81_RS12755 (LVJ81_12755)	pilA	2597992..2599284 (+)	1293	WP_155970500.1	signal recognition particle-docking protein FtsY	Machinery gene
LVJ81_RS12760 (LVJ81_12760)	-	2599307..2600164 (+)	858	WP_019958603.1	DMT family transporter	-
LVJ81_RS12765 (LVJ81_12765)	-	2600185..2600838 (+)	654	WP_019958604.1	ATP-binding cassette domain-containing protein	-
LVJ81_RS12770 (LVJ81_12770)	ftsX	2600839..2601756 (+)	918	WP_019958605.1	permease-like cell division protein FtsX	-
LVJ81_RS12775 (LVJ81_12775)	-	2601862..2602509 (+)	648	WP_019958606.1	YitT family protein	-
LVJ81_RS12780 (LVJ81_12780)	murJ	2602564..2604123 (-)	1560	WP_026353593.1	murein biosynthesis integral membrane protein MurJ	-

Sequence

Protein

• Length: 430 a.a.
• Molecular weight: 45922.36 Da
• Isoelectric Point: 4.4260

>NTDB_id=651922 LVJ81_RS12755 WP_155970500.1 2597992..2599284(+) (pilA) [Vitreoscilla stercoraria strain SAG 1488-6]
MVVPAEETISADEAEKPAALVEDAQPVVQGWARGIVPTKVENVAATVEPIALAEVQDIAVPTQEAVAVVVEETVPVSSES
SFFTGNWATNVVEVEEAIIETIAPTTAPVVKPVHSNPVSNFEPNESVSSWTARLKQGLSKSRDKLGKSLAGVFGGAQIDE
DLYEELEDVLLTSDMGVAATEHLLKEVRERVSLKGLKDPQELREALKDALVELIEPLQQPLEIPADAKPFVIMMTGVNGA
GKTTSIGKLATHYQRQDKSVLLAAGDTFRAAAREQLIEWGARNNVTVISQATGDSAAVCFDAMHAAQARGTDIVLADTAG
RLPTQLHLMEEIKKVKRVMQKSMDTAPHEIILVLDANIGQNAINQVIAFDDALGLTGLILTKLDGTAKGGVIAALAKTRP
IPIRFIGVGEGIEDLRPFNARDYAEALLGD

Nucleotide

• Length: 1293 bp

>NTDB_id=651922 LVJ81_RS12755 WP_155970500.1 2597992..2599284(+) (pilA) [Vitreoscilla stercoraria strain SAG 1488-6]
ATGGTGGTGCCTGCGGAGGAGACTATCTCGGCTGACGAAGCAGAAAAACCAGCAGCTTTAGTGGAGGACGCCCAGCCAGT
CGTACAAGGTTGGGCAAGAGGTATTGTGCCGACTAAGGTTGAAAACGTTGCGGCAACAGTTGAGCCGATAGCCTTGGCAG
AGGTGCAGGATATTGCCGTGCCGACTCAAGAAGCGGTGGCAGTTGTTGTAGAAGAAACAGTACCAGTATCTTCAGAATCT
TCGTTCTTTACGGGCAATTGGGCAACCAATGTTGTTGAAGTAGAAGAAGCCATTATTGAAACGATTGCGCCAACGACGGC
ACCTGTTGTGAAGCCGGTGCATAGCAATCCTGTTAGCAATTTTGAACCCAATGAATCTGTGAGCAGTTGGACAGCACGTT
TGAAGCAAGGCTTGAGCAAATCGCGTGACAAATTGGGCAAGTCTTTGGCGGGCGTTTTTGGTGGTGCGCAAATCGATGAA
GATTTGTACGAAGAGTTGGAAGATGTGTTGTTGACCAGTGATATGGGTGTGGCCGCAACTGAGCATTTGTTAAAAGAAGT
GCGCGAGCGTGTGAGTTTGAAAGGTTTGAAAGACCCACAAGAGCTGCGTGAGGCCTTGAAAGATGCGTTGGTTGAGTTGA
TTGAGCCCTTGCAACAACCATTGGAAATTCCTGCGGATGCCAAACCTTTTGTGATTATGATGACAGGTGTGAATGGTGCG
GGCAAAACCACTTCAATAGGTAAATTGGCGACGCATTACCAACGACAAGACAAATCAGTGTTGTTGGCGGCAGGGGATAC
TTTCCGTGCGGCAGCACGTGAGCAATTGATTGAGTGGGGCGCACGCAATAATGTGACCGTGATTTCTCAAGCGACAGGCG
ATTCTGCAGCGGTGTGTTTTGATGCGATGCATGCAGCGCAAGCGCGTGGTACCGATATTGTCTTGGCAGACACTGCAGGC
CGCTTGCCGACACAATTGCATTTGATGGAAGAAATCAAAAAAGTCAAACGTGTGATGCAAAAGTCTATGGACACTGCACC
ACATGAAATTATCTTGGTTTTGGATGCCAATATTGGTCAAAATGCCATCAATCAAGTGATTGCGTTTGACGATGCTTTGG
GTTTGACAGGTTTGATTTTGACCAAACTCGATGGCACTGCCAAAGGTGGCGTGATTGCTGCTTTGGCAAAAACCCGTCCG
ATTCCAATTCGTTTCATTGGCGTGGGTGAAGGCATCGAAGATTTGCGCCCATTCAATGCGCGCGATTATGCCGAAGCTTT
GTTAGGTGATTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (229-429)

• SRP54-type protein, helical bundle domain (SRP54_N) (144-210)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	65.039	90.465	0.588