Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OHS16_RS13335 Genome accession   NZ_CP107996
Coordinates   2946147..2947271 (+) Length   374 a.a.
NCBI ID   WP_328537404.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00344     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 2941147..2952271
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHS16_RS13320 (OHS16_13320) - 2941978..2942778 (+) 801 WP_328537401.1 hypothetical protein -
  OHS16_RS13325 (OHS16_13325) - 2942791..2944524 (-) 1734 WP_328537402.1 hypothetical protein -
  OHS16_RS13330 (OHS16_13330) radA/sms 2944696..2946090 (+) 1395 WP_328537403.1 DNA repair protein RadA Machinery gene
  OHS16_RS13335 (OHS16_13335) disA 2946147..2947271 (+) 1125 WP_328537404.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OHS16_RS13340 (OHS16_13340) - 2947360..2948193 (-) 834 WP_328540829.1 hypothetical protein -
  OHS16_RS13345 (OHS16_13345) - 2948377..2948985 (+) 609 WP_328537405.1 phosphatase PAP2 family protein -
  OHS16_RS13350 (OHS16_13350) - 2949002..2949916 (+) 915 WP_328537406.1 A/G-specific adenine glycosylase -
  OHS16_RS13355 (OHS16_13355) - 2950091..2950645 (+) 555 WP_328537407.1 SigE family RNA polymerase sigma factor -
  OHS16_RS13360 (OHS16_13360) - 2950633..2951343 (+) 711 WP_328537408.1 hypothetical protein -
  OHS16_RS13365 (OHS16_13365) cseB 2951356..2952054 (+) 699 WP_328537409.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40265.15 Da        Isoelectric Point: 5.0166

>NTDB_id=650923 OHS16_RS13335 WP_328537404.1 2946147..2947271(+) (disA) [Streptomyces sp. NBC_00344]
MAANDRAASGKSGGSSSGTEALMRATLSAVAPGTALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVMDVEFAATRLR
ELCKLDGALILDKDISKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCGFPVVSVSQSMHLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVIRDYVPEPTAKRSRTVAEALVELNTLSHTELLELPVVARALGYSGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=650923 OHS16_RS13335 WP_328537404.1 2946147..2947271(+) (disA) [Streptomyces sp. NBC_00344]
GTGGCAGCCAATGACCGGGCAGCATCCGGAAAATCCGGCGGGAGCTCATCCGGCACCGAAGCGCTGATGCGCGCCACACT
GAGCGCCGTCGCGCCCGGTACTGCGCTGCGCGACGGCCTCGAACGCATCCTGCGCGGCAACACCGGCGGGCTGATCGTCC
TCGGCATGGACAAGACGGTCGAGTCGATGTGCACCGGCGGTTTCGTCATGGATGTCGAGTTCGCCGCCACGCGCCTGCGT
GAGCTGTGCAAACTCGACGGCGCGCTGATCCTCGACAAGGACATCAGCAAGATCCTCCGGGCCGGTGTCCAGCTGGTCCC
CGACGCGTCCATCCCCACCGAGGAGACCGGCACCCGCCACCGCACCGCGGACCGGGTCTCCAAACAGTGCGGCTTCCCGG
TCGTCTCCGTATCGCAGTCGATGCATCTGATCGCGCTGTACGTCGACGGGGAGCGCCGGGTCCTCGAGGAGTCCGCGGCG
ATCCTGTCCCGCGCGAATCAGGCTCTGGCCACCCTGGAGCGGTACAAGCTCCGGCTCGACGAGGTCGCGGGCACGCTCTC
CGCTCTGGAGATCGAGGACCTGGTGACGGTCCGCGATGTCACCGCGGTGGCGCAGCGGCTCGAGATGGTGCGGCGGATCG
CCACCGAGATCGCCGAGTACGTGGTGGAGCTGGGCACCGACGGCCGCCTCCTCTCCCTCCAGCTCGACGAGTTGATCGCC
GGGGTGGAGCCGGAGCGCGAGCTCGTCATCCGGGACTACGTACCCGAGCCCACCGCGAAGCGTTCGCGCACCGTCGCCGA
GGCACTGGTCGAACTGAACACGCTGAGCCACACCGAGCTGCTCGAACTGCCGGTGGTGGCACGGGCACTGGGATACAGCG
GGTCGCCCGAGACACTCGACTCCGCGGTGTCGCCGCGGGGGTACCGGCTGCTGGCGAAGGTGCCGCGGCTGCCCGGGGCG
ATCATCGAGCGGCTTGTCGAGCACTTCGGGGGGCTGCAGAAGCTGCTCGCCGCGAGCGTCGACGATCTGCAGACCGTGGA
CGGAGTGGGCGAGGCCCGCGCCCGGAGCGTACGGGAGGGACTTTCCCGGCTGGCCGAGTCCTCGATCCTGGAAAGGTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

46.857

93.583

0.439