Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OHT74_RS17010 Genome accession   NZ_CP107983
Coordinates   3797167..3798291 (+) Length   374 a.a.
NCBI ID   WP_266665127.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00354     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3792167..3803291
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHT74_RS16995 (OHT74_17020) - 3793159..3794025 (+) 867 WP_266996351.1 hypothetical protein -
  OHT74_RS17000 (OHT74_17025) - 3794189..3795289 (-) 1101 Protein_3372 sigma-70 family RNA polymerase sigma factor -
  OHT74_RS17005 (OHT74_17030) radA/sms 3795509..3796912 (+) 1404 WP_328620641.1 DNA repair protein RadA Machinery gene
  OHT74_RS17010 (OHT74_17035) disA 3797167..3798291 (+) 1125 WP_266665127.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OHT74_RS17015 (OHT74_17040) - 3798400..3799137 (-) 738 WP_328620642.1 hypothetical protein -
  OHT74_RS17020 (OHT74_17045) - 3799361..3799783 (+) 423 WP_328620643.1 phosphatase PAP2 family protein -
  OHT74_RS17025 (OHT74_17050) - 3799805..3800758 (+) 954 WP_266665131.1 A/G-specific adenine glycosylase -
  OHT74_RS17030 (OHT74_17055) - 3800942..3801514 (+) 573 WP_030158464.1 SigE family RNA polymerase sigma factor -
  OHT74_RS17035 (OHT74_17060) - 3801553..3802191 (+) 639 WP_266672827.1 hypothetical protein -
  OHT74_RS17040 (OHT74_17065) cseB 3802262..3802975 (+) 714 WP_266665133.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40334.30 Da        Isoelectric Point: 5.0226

>NTDB_id=650758 OHT74_RS17010 WP_266665127.1 3797167..3798291(+) (disA) [Streptomyces sp. NBC_00354]
MAAKDGAAASGKSGASSKQEAMMRASLSAVAPGQPLRDGLERIVRGNTGGLIVLGMDKSVEAMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDITKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCGFPVVSVSQSMRLIALYVDGERRVLEESGA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELTV
GIEQERELVIRDYVPEPTAKRSRTVDEALPALDALTHPELLELGIVARALGYTGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=650758 OHT74_RS17010 WP_266665127.1 3797167..3798291(+) (disA) [Streptomyces sp. NBC_00354]
GTGGCAGCCAAGGACGGGGCAGCAGCATCCGGGAAGTCGGGCGCGAGCTCCAAGCAGGAGGCCATGATGCGCGCCTCGCT
GAGCGCGGTCGCACCTGGTCAGCCCCTGCGTGACGGTCTGGAACGGATCGTCCGCGGCAACACCGGCGGCCTCATCGTCC
TCGGGATGGACAAGTCCGTCGAGGCGATGTGCACGGGCGGTTTCGTCCTGGACGTGGAGTTCACCGCGACCCGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGCGCTGATCCTGGACAAGGACATCACCAAGATCCTGCGGGCCGGCGTCCAGCTGGTGCC
TGACGCGTCGATCCCGACGGAGGAGACGGGCACCCGTCACCGCACCGCGGACCGCGTCTCGAAGCAGTGCGGCTTCCCCG
TGGTGTCGGTGTCGCAGTCGATGCGGCTGATCGCGCTGTACGTGGACGGGGAGCGCCGGGTCCTGGAGGAGTCCGGGGCG
ATCCTGTCGCGGGCGAACCAGGCGCTGGCCACGCTGGAGCGGTACAAGCTGCGGCTCGACGAGGTCGCGGGGACGCTGTC
GGCGCTGGAGATCGAGGACCTGGTCACGGTGCGCGACGTGACGGCGGTCGCGCAGCGGCTGGAAATGGTTCGCCGCATTG
CCACGGAAATCGCTGAATACGTGGTCGAGCTGGGTACGGACGGGCGACTGCTGTCGCTCCAGCTGGACGAGCTGACGGTC
GGCATCGAGCAGGAGCGGGAGCTGGTGATCCGGGACTACGTGCCGGAGCCGACGGCGAAGCGCTCCCGCACGGTGGACGA
GGCGCTGCCGGCGCTGGACGCCCTGACGCATCCGGAGCTGCTGGAGCTCGGCATCGTGGCGCGCGCGCTGGGGTACACGG
GCTCGCCGGAGACGCTCGACTCGGCGGTGTCCCCGCGGGGGTACCGGCTGCTGGCGAAGGTTCCGCGGCTGCCGGGGGCC
ATCATCGAGCGGCTGGTGGAGCACTTCGGGGGCCTGCAGAAGTTGCTGGCCGCGTCGGTGGACGATCTGCAGACGGTCGA
CGGGGTCGGGGAAGCCCGTGCGCGGAGCGTCCGCGAGGGCCTGTCCCGCCTGGCGGAGTCCTCGATCCTCGAGCGCTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.706

96.524

0.441