Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG432_RS14090 Genome accession   NZ_CP107918
Coordinates   3130683..3131807 (+) Length   374 a.a.
NCBI ID   WP_267058701.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00442     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3125683..3136807
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG432_RS14075 (OG432_14080) - 3126484..3127218 (+) 735 WP_328315100.1 hypothetical protein -
  OG432_RS14080 (OG432_14085) - 3127243..3128916 (-) 1674 WP_328311281.1 hypothetical protein -
  OG432_RS14085 (OG432_14090) radA/sms 3129184..3130581 (+) 1398 WP_328311282.1 DNA repair protein RadA Machinery gene
  OG432_RS14090 (OG432_14095) disA 3130683..3131807 (+) 1125 WP_267058701.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG432_RS14095 (OG432_14100) - 3132041..3132898 (-) 858 WP_328311283.1 hypothetical protein -
  OG432_RS14100 (OG432_14105) - 3133132..3133758 (+) 627 WP_328311284.1 phosphatase PAP2 family protein -
  OG432_RS14105 (OG432_14110) - 3133811..3134743 (+) 933 WP_328311285.1 A/G-specific adenine glycosylase -
  OG432_RS14110 (OG432_14115) - 3135028..3135585 (+) 558 WP_328311286.1 SigE family RNA polymerase sigma factor -
  OG432_RS14115 (OG432_14120) - 3135606..3136313 (+) 708 WP_328311287.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40422.21 Da        Isoelectric Point: 5.1189

>NTDB_id=649244 OG432_RS14090 WP_267058701.1 3130683..3131807(+) (disA) [Streptomyces sp. NBC_00442]
MAANDRASSPGKSGTGSGNEALMRAALSAVAPGTALRDGLERILRGNTGGLLVLGLDKTVDSMCTGGFVLDVEFAATRLR
ELCKLDGALVLDKDITKIHRAGVQLVPDAGIPTEETGTRHRTADRVSKQCNYPVVSVSQSMRLIALYVNGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALRELNDLTHAELLELPIVARALGYSGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=649244 OG432_RS14090 WP_267058701.1 3130683..3131807(+) (disA) [Streptomyces sp. NBC_00442]
GTGGCAGCCAACGACCGGGCATCATCACCCGGAAAGTCCGGCACAGGCTCCGGTAACGAAGCACTGATGCGTGCCGCGCT
GAGCGCCGTCGCGCCCGGCACCGCGCTCCGCGACGGCCTGGAGCGCATCCTGCGCGGCAACACCGGCGGTCTGCTGGTGC
TGGGCCTCGACAAGACCGTCGACTCGATGTGCACGGGCGGCTTCGTCCTGGACGTCGAGTTCGCCGCCACCCGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGCGCTCGTCCTCGACAAGGACATCACCAAGATCCACCGGGCCGGTGTGCAGCTCGTGCC
GGACGCCGGCATCCCCACCGAGGAGACCGGCACCCGCCACCGCACGGCGGACCGCGTCTCCAAGCAGTGCAACTACCCGG
TGGTGTCCGTCAGCCAGTCCATGCGGCTGATCGCGCTGTACGTGAACGGGGAGCGCCGGGTCCTCGAGGAGTCGGCGGCG
ATCCTGTCCCGCGCGAACCAGGCGCTCGCGACCCTGGAGCGCTACAAGCTCCGCCTCGACGAGGTGGCGGGCACGCTGTC
CGCCCTCGAAATCGAGGACCTGGTGACGGTCCGGGACGTGACGGCGGTGGCCCAGCGTCTGGAGATGGTGCGGCGCATCG
CGACGGAGATCGCCGAGTACGTGGTGGAGCTGGGCACGGACGGGCGCCTGCTCTCGCTCCAGCTGGACGAGCTGATCGCC
GGGGTCGAGCCGGAGCGGGAGCTGGTGGTACGGGACTACGTGCCCGAACCCACGGCCAAGCGCTCGCGGACGGTGGACGA
GGCGCTGCGCGAGCTCAACGACCTCACCCACGCGGAGCTGCTCGAACTGCCCATAGTGGCACGGGCGTTGGGCTACAGCG
GCTCGCCCGAGACGCTGGACTCGGCGGTGTCCCCACGGGGCTACCGGCTCCTCGCGAAGGTGCCGAGGCTGCCGGGGGCG
ATCATCGAGCGTCTGGTCGAGCACTTCGGGGGGCTTCAGAAGCTGCTGGCCGCCTCGGTGGACGACCTCCAGACGGTCGA
CGGGGTCGGGGAGGCGCGGGCGCGGAGCGTGCGGGAGGGCCTGTCGAGGCTGGCCGAGTCCTCCATCCTGGAGCGCTACG
TATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436