Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   OHO27_RS17695 Genome accession   NZ_CP107917
Coordinates   3978934..3980058 (+) Length   374 a.a.
NCBI ID   WP_328425026.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00443     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 3973934..3985058
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHO27_RS17680 (OHO27_17680) - 3974550..3975419 (+) 870 WP_328425020.1 hypothetical protein -
  OHO27_RS17685 (OHO27_17685) - 3975443..3977233 (-) 1791 WP_328425022.1 hypothetical protein -
  OHO27_RS17690 (OHO27_17690) radA/sms 3977444..3978853 (+) 1410 WP_328425024.1 DNA repair protein RadA Machinery gene
  OHO27_RS17695 (OHO27_17695) disA 3978934..3980058 (+) 1125 WP_328425026.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OHO27_RS17700 (OHO27_17700) - 3980110..3980934 (-) 825 WP_328425028.1 hypothetical protein -
  OHO27_RS17705 (OHO27_17705) - 3981121..3981753 (+) 633 WP_328425030.1 phosphatase PAP2 family protein -
  OHO27_RS17710 (OHO27_17710) - 3981757..3982416 (-) 660 WP_328425032.1 response regulator transcription factor -
  OHO27_RS17715 (OHO27_17715) - 3982413..3984005 (-) 1593 WP_328425034.1 histidine kinase -

Sequence

Protein


Download         Length: 374 a.a.        Molecular weight: 40083.83 Da        Isoelectric Point: 5.0029

>NTDB_id=649161 OHO27_RS17695 WP_328425026.1 3978934..3980058(+) (disA) [Streptomyces sp. NBC_00443]
MAANDRAAAPGKSGGSSGADGLMRASLSAVAPGTALRDGLERILRGNTGGLIVLGSDKTVEVMCTGGFVLDVEFTATRLR
ELCKLDGGIVLSSDLSKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGHRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALYELDALTHAELLELSTVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=649161 OHO27_RS17695 WP_328425026.1 3978934..3980058(+) (disA) [Streptomyces sp. NBC_00443]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGCTCCGGTGCCGATGGCCTGATGCGCGCCTCACT
GAGCGCCGTGGCACCCGGCACGGCCCTGCGCGACGGGCTTGAGCGGATCCTCCGCGGCAACACCGGCGGACTCATCGTCC
TCGGCTCCGACAAGACCGTCGAGGTGATGTGCACGGGCGGATTCGTCCTGGATGTCGAGTTCACGGCGACGCGACTGCGT
GAGCTGTGCAAGCTCGACGGCGGCATCGTGCTGTCGTCGGATCTGTCGAAGATCCTGCGCGCGGGCGTCCAGCTGGTCCC
GGACCCGACGATCCCCACCGAGGAGACGGGCACCCGGCACCGCACAGCGGACCGGGTCAGCAAGCAGGTCGGCTTCCCGG
TCGTCTCGGTCTCCCAGTCGATGCGGCTGATCGCGCTCTACGTCGACGGCCACCGCCGCGTCCTGGAGGACTCGGCGGCG
ATCCTCTCCCGTGCCAACCAGGCCCTGGCGACCCTGGAGCGCTACAAGCTCCGCCTCGACGAGGTCGCGGGAACGTTGTC
AGCGCTGGAGATCGAGGACCTGGTGACGGTCCGCGATGTCTCGGCGGTCGCCCAGCGCCTGGAGATGGTCCGGCGTATCG
CGACCGAGATCGCCGAGTACGTGGTGGAGCTCGGCACCGACGGACGTCTCCTGGCCCTCCAGCTGGACGAGTTGATCGCG
GGTGTGGAGCCCGAGCGCGAGCTCGTGGTGCGCGACTACGTCCCCGAGCCGACGGCCAAGCGCTCCCGCACGGTCGACGA
GGCGCTGTACGAGCTGGACGCGCTCACCCACGCCGAGCTTCTCGAACTGTCCACGGTGGCAAGGGCGTTGGGCTACACCG
GATCCCCGGAGGCGCTGGACTCCGCGGTCTCCCCGCGTGGCTTCCGCCTCCTGGCCAAGGTGCCGAGGCTGCCGGGCGCG
ATCATCGACCGCCTGGTGGAGCACTTCGGCGGCCTGCAGAAGCTGCTCGCCGCGAGCGTGGACGACCTCCAGACGGTGGA
CGGCGTCGGCGAGGCCCGGGCGCGCAGCGTCCGTGAGGGCCTGTCGCGGCTGGCGGAGAGCTCGATCCTGGAGCGGTACG
TCTAG

Domains

Predicted by InterProScan.

DisA bacterial checkpoint controller linker region (DisA-linker)

(155-297)

Helix-hairpin-helix motif (HHH_2)

(324-359)

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(38-151)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.706

96.524

0.441