Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OHA71_RS22875 Genome accession   NZ_CP107916
Coordinates   5036437..5037561 (+) Length   374 a.a.
NCBI ID   WP_210578002.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00444     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 5031437..5042561
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHA71_RS22860 (OHA71_22855) - 5032112..5032969 (+) 858 WP_328359504.1 hypothetical protein -
  OHA71_RS22865 (OHA71_22860) - 5033015..5034745 (-) 1731 WP_328439242.1 hypothetical protein -
  OHA71_RS22870 (OHA71_22865) radA/sms 5034945..5036354 (+) 1410 WP_328359510.1 DNA repair protein RadA Machinery gene
  OHA71_RS22875 (OHA71_22870) disA 5036437..5037561 (+) 1125 WP_210578002.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OHA71_RS22880 (OHA71_22875) - 5037669..5038511 (-) 843 WP_328439243.1 hypothetical protein -
  OHA71_RS22885 (OHA71_22880) - 5038716..5039651 (+) 936 WP_328359517.1 A/G-specific adenine glycosylase -
  OHA71_RS22890 (OHA71_22885) - 5039896..5040453 (+) 558 WP_210577999.1 SigE family RNA polymerase sigma factor -
  OHA71_RS22895 (OHA71_22890) - 5040555..5041115 (+) 561 WP_328442375.1 hypothetical protein -
  OHA71_RS22900 (OHA71_22895) cseB 5041246..5041950 (+) 705 WP_328359521.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40184.96 Da        Isoelectric Point: 5.1026

>NTDB_id=649064 OHA71_RS22875 WP_210578002.1 5036437..5037561(+) (disA) [Streptomyces sp. NBC_00444]
MAANDRAAAPGKSGGSSGADGLMRASLSAVAPGTAMRDGLERVLRGNTGGLIVLGFDKTVEAMCTGGFVLDVEFTATRLR
ELCKLDGGIVLNSDLSKILRAGVQFVPDARIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVEEALSELDALHHAELLELPTVARALGYTGSPEALDTAVSPRGFRLLAKVPRLPGA
IIDRLVDHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=649064 OHA71_RS22875 WP_210578002.1 5036437..5037561(+) (disA) [Streptomyces sp. NBC_00444]
GTGGCAGCCAACGACCGGGCGGCAGCTCCCGGAAAGTCCGGTGGGAGTTCCGGTGCCGATGGCCTGATGCGCGCCTCACT
GAGCGCCGTGGCACCCGGCACGGCCATGCGCGACGGCCTTGAGCGGGTGCTCCGCGGCAATACCGGCGGTCTCATCGTGC
TCGGCTTCGACAAGACCGTCGAGGCGATGTGCACGGGCGGATTCGTGCTGGACGTCGAGTTCACGGCCACGCGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTGCTCAACTCCGACCTGTCGAAGATCCTGCGGGCGGGCGTGCAGTTCGTCCC
CGACGCGAGGATCCCGACCGAGGAGACGGGCACCCGGCACCGCACGGCGGACCGGGTCTCCAAGCAGGTCGGTTTCCCCG
TCGTCTCCGTCTCCCAGTCCATGCGGCTGATCGCGCTGTACGTCGACGGCCAGCGCCGCGTCCTGGAGGACTCGGCGGCG
ATCCTGTCCCGCGCCAACCAGGCGCTGGCGACCCTGGAGCGGTACAAGCTCCGCCTGGACGAGGTCGCGGGAACGTTGTC
AGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTCTCCGCCGTCGCCCAGCGCCTGGAGATGGTGCGCCGTATCG
CCACCGAAATCGCCGAGTATGTGGTCGAACTGGGCACCGACGGACGGCTCCTGGCCCTCCAGCTAGACGAGCTGATCGCC
GGCGTGGAGCCCGAGCGCGAGCTGGTCGTCCGGGACTACGTCCCCGAACCCACCGCGAAACGCTCCCGCACAGTCGAGGA
AGCCCTCTCCGAACTGGACGCCCTCCACCACGCCGAACTCCTCGAACTCCCCACGGTGGCACGGGCATTGGGCTACACCG
GATCCCCCGAGGCCCTCGACACCGCAGTATCACCCCGCGGCTTCCGCCTCCTGGCAAAGGTCCCCCGCCTCCCGGGGGCC
ATCATCGACCGCCTCGTAGACCACTTCGGCGGCCTGCAGAAACTCCTCGCCGCGAGCGTCGACGACCTGCAGACGGTGGA
CGGAGTGGGCGAGGCAAGGGCCCGAAGCGTACGGGAGGGCCTGTCGAGGCTGGCGGAGAGCTCGATCCTGGAACGGTACG
TCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.598

96.524

0.43