Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OHU74_RS20510 Genome accession   NZ_CP107907
Coordinates   4418281..4419405 (-) Length   374 a.a.
NCBI ID   WP_330297894.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00454     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4413281..4424405
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHU74_RS20480 (OHU74_20485) cseB 4413406..4414119 (-) 714 WP_371617263.1 two-component system response regulator CseB -
  OHU74_RS20485 (OHU74_20490) - 4414174..4414833 (-) 660 WP_371619744.1 hypothetical protein -
  OHU74_RS20490 (OHU74_20495) - 4414860..4415420 (-) 561 WP_069920779.1 SigE family RNA polymerase sigma factor -
  OHU74_RS20495 (OHU74_20500) - 4415596..4416582 (-) 987 WP_371617264.1 A/G-specific adenine glycosylase -
  OHU74_RS20500 (OHU74_20505) - 4416600..4417208 (-) 609 WP_371617265.1 phosphatase PAP2 family protein -
  OHU74_RS20505 (OHU74_20510) - 4417379..4418188 (+) 810 WP_371617266.1 hypothetical protein -
  OHU74_RS20510 (OHU74_20515) disA 4418281..4419405 (-) 1125 WP_330297894.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OHU74_RS20515 (OHU74_20520) radA/sms 4419674..4421089 (-) 1416 WP_330297895.1 DNA repair protein RadA Machinery gene
  OHU74_RS20520 (OHU74_20525) - 4421285..4423123 (+) 1839 WP_371617267.1 hypothetical protein -
  OHU74_RS20525 (OHU74_20530) - 4423136..4424014 (-) 879 WP_371617268.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40330.32 Da        Isoelectric Point: 5.1222

>NTDB_id=648706 OHU74_RS20510 WP_330297894.1 4418281..4419405(-) (disA) [Streptomyces sp. NBC_00454]
MAAKDGAAASGKSGASSKQEAMMRASLSAVAPGQPLRDGLERIVRGNTGGLIVLGMDKSVEAMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDLTKILRAGVQLVPDASIHTEETGTRHRTADRVSKQCGFPVVSVSQSMRLIALYVDGERRVLEESGA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVGAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELTV
GIEQERELVIRDYVPEPTAKRSRTVEEALPALDALTHPELLELAIVAKALGYTGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=648706 OHU74_RS20510 WP_330297894.1 4418281..4419405(-) (disA) [Streptomyces sp. NBC_00454]
GTGGCAGCCAAGGACGGGGCAGCAGCATCCGGGAAGTCGGGCGCGAGCTCCAAGCAGGAGGCCATGATGCGTGCCTCGCT
GAGCGCGGTCGCACCCGGTCAGCCGCTGCGCGACGGACTCGAACGGATCGTCCGCGGCAACACCGGCGGGCTCATCGTCC
TCGGCATGGACAAGTCCGTGGAAGCGATGTGCACGGGCGGTTTCGTCCTGGACGTGGAGTTCACCGCGACCCGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGCGCTGATCCTGGACAAGGACCTCACCAAGATCCTGCGGGCGGGCGTGCAGCTCGTTCC
GGACGCCTCCATCCACACGGAGGAGACCGGTACCCGGCACCGCACCGCGGACCGCGTCTCGAAGCAGTGCGGGTTCCCGG
TGGTCTCGGTGTCGCAGTCGATGCGGCTGATCGCGCTGTACGTGGACGGCGAGCGGCGCGTGCTGGAGGAGTCCGGGGCG
ATCCTGTCGCGGGCGAACCAGGCGCTGGCCACGCTGGAGCGGTACAAGCTCCGCCTGGACGAGGTGGCGGGCACGCTGTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTCCGCGACGTCGGCGCGGTGGCGCAGCGGCTGGAAATGGTCCGCCGGATCG
CGACGGAAATCGCTGAATACGTGGTGGAGCTCGGCACGGACGGCCGACTGCTGTCGCTCCAGCTGGACGAGCTGACGGTC
GGGATCGAGCAGGAGCGCGAGCTGGTCATCCGGGACTACGTGCCGGAGCCGACGGCGAAGCGGTCGCGGACGGTGGAGGA
AGCGCTGCCCGCGCTGGACGCGCTGACCCACCCGGAGCTGCTGGAACTGGCGATCGTGGCGAAGGCGCTGGGGTACACCG
GTTCGCCGGAGACGCTGGACTCGGCGGTGTCCCCGCGGGGCTACCGGCTGCTGGCGAAGGTTCCCCGGCTGCCGGGCGCG
ATCATCGAGCGGCTGGTGGAGCACTTCGGTGGCCTGCAGAAGCTGCTGGCCGCCTCCGTGGACGACCTGCAGACGGTCGA
CGGGGTCGGCGAGGCGCGTGCGCGCAGCGTCCGCGAGGGGCTGTCCCGGTTGGCGGAGTCCTCGATCCTGGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.983

96.524

0.444