Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG734_RS28080 Genome accession   NZ_CP107780
Coordinates   6484857..6485981 (-) Length   374 a.a.
NCBI ID   WP_330290260.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00576     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 6479857..6490981
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG734_RS28055 (OG734_28115) - 6480678..6481628 (-) 951 WP_330290255.1 A/G-specific adenine glycosylase -
  OG734_RS28060 (OG734_28120) - 6481875..6482690 (+) 816 WP_330290256.1 oxidoreductase -
  OG734_RS28065 (OG734_28125) - 6482740..6483087 (+) 348 WP_330290257.1 hypothetical protein -
  OG734_RS28070 (OG734_28130) - 6483140..6483730 (+) 591 WP_330290258.1 TetR/AcrR family transcriptional regulator -
  OG734_RS28075 (OG734_28135) - 6483904..6484758 (+) 855 WP_330290259.1 hypothetical protein -
  OG734_RS28080 (OG734_28140) disA 6484857..6485981 (-) 1125 WP_330290260.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG734_RS28085 (OG734_28145) radA/sms 6486063..6487472 (-) 1410 WP_330290261.1 DNA repair protein RadA Machinery gene
  OG734_RS28090 (OG734_28150) - 6487691..6489493 (+) 1803 WP_330290262.1 hypothetical protein -
  OG734_RS28095 (OG734_28155) - 6489504..6490379 (-) 876 WP_330290263.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 39889.69 Da        Isoelectric Point: 4.9130

>NTDB_id=646050 OG734_RS28080 WP_330290260.1 6484857..6485981(-) (disA) [Streptomyces sp. NBC_00576]
MAANDRAAAPGKSGGSSGADGLMRASLSAVAPGTALRDGLERILRGNTGGLIVLGSDKTVEAMCTGGFVLDVEFSATRLR
ELCKLDGGIVVSSDLSKILRAGVQLVPDPMIPTEETGTRHRTADRVSKQVGFSVISVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVVQRLEMVRLIATEIAGYVLELGTDGRLLALQLEELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALAELDALSHAELLELSTVAKALGYTGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=646050 OG734_RS28080 WP_330290260.1 6484857..6485981(-) (disA) [Streptomyces sp. NBC_00576]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGCTCCGGTGCCGATGGCCTGATGCGCGCCTCACT
GAGCGCTGTGGCACCCGGCACGGCGCTGCGCGACGGGCTTGAACGGATTCTCCGCGGTAACACCGGCGGACTCATCGTGC
TCGGCTCCGACAAGACTGTCGAAGCGATGTGCACAGGCGGTTTCGTCCTGGACGTCGAGTTCTCGGCGACGCGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTGGTCTCCTCGGACCTGTCCAAGATCCTGCGGGCCGGCGTACAGCTGGTCCC
CGACCCGATGATCCCCACCGAGGAGACAGGCACCCGGCACCGCACCGCCGACCGCGTGTCGAAACAGGTGGGCTTCTCGG
TCATCTCGGTCTCCCAGTCGATGAGACTCATCGCGCTGTACGTGGACGGCCAGCGCCGGGTCCTGGAGGACTCGGCGGCG
ATCCTCTCCCGCGCGAACCAGGCCCTGGCGACCCTGGAGCGCTACAAGCTCCGCCTCGACGAGGTCGCGGGCACGCTCTC
CGCCCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTCTCGGCGGTGGTGCAGCGTCTGGAGATGGTCCGCCTCATCG
CGACGGAAATCGCCGGGTACGTGCTCGAGCTGGGCACCGACGGGCGGCTTCTGGCCCTCCAGCTGGAGGAGTTGATCGCG
GGCGTGGAGCCGGAGCGCGAACTGGTGGTCCGGGACTACGTACCCGAGCCGACCGCCAAACGCTCGCGCACGGTCGACGA
GGCGCTCGCGGAACTCGACGCGCTCAGCCACGCCGAGCTGCTCGAACTCTCCACGGTGGCCAAGGCCCTGGGCTACACGG
GCTCACCCGAGACCCTCGACTCGGCGGTCTCCCCCCGCGGCTTCCGCCTCCTGGCGAAGGTGCCACGCCTGCCCGGCGCG
ATCATCGACCGCCTGGTGGAACACTTCGGCGGCCTGCAGAAGCTGCTGGCGGCGAGCGTCGACGACCTCCAGACGGTGGA
CGGGGTCGGCGAGGCGAGGGCGCGCAGCGTGCGGGAGGGGCTGTCGCGGCTGGCGGAGTCGTCGATTCTGGAGCGGTACG
TGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.983

96.524

0.444