Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   ODQ18_RS15405 Genome accession   NZ_CP107039
Coordinates   2970362..2971189 (-) Length   275 a.a.
NCBI ID   WP_003226767.1    Uniprot ID   A0ABU0VCW3
Organism   Bacillus subtilis strain 11060     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 2965362..2976189
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ODQ18_RS15380 (ODQ18_15380) abrB 2967708..2967998 (+) 291 WP_003226760.1 transition state genes transcriptional regulator AbrB Regulator
  ODQ18_RS15385 (ODQ18_15385) rsmI 2968047..2968925 (-) 879 WP_003243457.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  ODQ18_RS15390 (ODQ18_15390) yazA 2968900..2969199 (-) 300 WP_003242983.1 GIY-YIG nuclease family protein -
  ODQ18_RS15395 (ODQ18_15395) trmNF 2969186..2969929 (-) 744 WP_003226765.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  ODQ18_RS15400 (ODQ18_15400) yabA 2969988..2970347 (-) 360 WP_003218308.1 replication initiation-control protein YabA -
  ODQ18_RS15405 (ODQ18_15405) yaaT 2970362..2971189 (-) 828 WP_003226767.1 competence/sporulation regulator complex protein RicT Regulator
  ODQ18_RS15410 (ODQ18_15410) holB 2971192..2972181 (-) 990 WP_003226770.1 DNA polymerase III subunit delta' -
  ODQ18_RS15415 (ODQ18_15415) yaaR 2972193..2972633 (-) 441 WP_009966249.1 YaaR family protein -
  ODQ18_RS15420 (ODQ18_15420) darA 2972646..2972975 (-) 330 WP_003242755.1 cyclic di-AMP receptor DarA -
  ODQ18_RS15425 (ODQ18_15425) tmk 2973049..2973687 (-) 639 WP_003226776.1 dTMP kinase -
  ODQ18_RS15430 (ODQ18_15430) efpO 2973684..2975126 (-) 1443 WP_003226777.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31233.09 Da        Isoelectric Point: 4.7700

>NTDB_id=640309 ODQ18_RS15405 WP_003226767.1 2970362..2971189(-) (yaaT) [Bacillus subtilis strain 11060]
MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFDICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTANGPAKVVGLNI
LERVLQVELINREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=640309 ODQ18_RS15405 WP_003226767.1 2970362..2971189(-) (yaaT) [Bacillus subtilis strain 11060]
TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTATTTTGATCCGAATGGATTTCATATAGAACA
TGACAGCTGCGTAATTGTAGAAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTAATTGCAAATAAACAGGTGGATGAGC
ATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTGGCTGACGAGCGCGATCTTCTCATTGTAGAAGAAAATAAACAG
GAAGCACTATCAGCATTTGATATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATGAAGCTGGTCGATGTTGAATT
CACGTTTGATCGCAATAAAGTCATTTTTTACTTCACTGCTGACGGCCGAGTCGACTTTAGAGAGCTTGTAAAGGATTTGG
CTTCTATCTTTAAGACAAGAATTGAGCTGCGCCAAATCGGAGTAAGGGATGAGGCAAAAATGCTCGGAGGAATCGGTCCT
TGCGGAAGAATGCTTTGCTGTTCAACGTTTCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGGATCAGAACTT
GTCTTTAAATCCTACGAAGATTTCGGGTCTTTGCGGACGATTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGA
CGGCAAAAGAACAGCTTCCGGATATAGGAGAAATGATTACGACAGCAAACGGTCCCGCGAAGGTCGTCGGACTAAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGATAAACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

99.636

100

0.996