Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrP   Type   Regulator
Locus tag   LV497_RS06985 Genome accession   NZ_CP090007
Coordinates   1510943..1512757 (+) Length   604 a.a.
NCBI ID   WP_038675388.1    Uniprot ID   A0A448A7C5
Organism   Streptococcus salivarius strain SALI-10     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 1505943..1517757
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LV497_RS06965 (LV497_06965) gdhA 1506568..1507920 (+) 1353 WP_002885547.1 NADP-specific glutamate dehydrogenase -
  LV497_RS06970 (LV497_06970) - 1508099..1509742 (+) 1644 WP_343086615.1 hypothetical protein -
  LV497_RS06975 (LV497_06975) - 1509900..1510310 (+) 411 WP_014633963.1 peptide deformylase -
  LV497_RS06980 (LV497_06980) rcrR 1510496..1510939 (+) 444 WP_245084317.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  LV497_RS06985 (LV497_06985) rcrP 1510943..1512757 (+) 1815 WP_038675388.1 ABC transporter ATP-binding protein Regulator
  LV497_RS06990 (LV497_06990) rcrQ 1512747..1514525 (+) 1779 WP_245084319.1 ABC transporter ATP-binding protein Regulator
  LV497_RS06995 (LV497_06995) - 1514633..1515256 (+) 624 WP_245084322.1 GNAT family N-acetyltransferase -
  LV497_RS07000 (LV497_07000) - 1515404..1516027 (+) 624 WP_070438408.1 GTP pyrophosphokinase family protein -
  LV497_RS07005 (LV497_07005) - 1516029..1516706 (+) 678 WP_037601879.1 response regulator transcription factor -

Sequence


Protein


Download         Length: 604 a.a.        Molecular weight: 67071.75 Da        Isoelectric Point: 6.1418

>NTDB_id=640142 LV497_RS06985 WP_038675388.1 1510943..1512757(+) (rcrP) [Streptococcus salivarius strain SALI-10]
MFKIFKRLTTKELIMIVLAVIFVCLNVYLNLKIPDYMSDITTLLSTKGTKASDIFAWNTDAPGMRMLLMSFAGFMASVVV
GFLAARTAASFTTRLRDDIFHQVLDFSDAEIKKFSIPSLLTRTTNDITQLQMVLTMGLQVITQGPIMAIWAITKIADKNG
NWLLALLVAVAVIAILMLFLLIMVMPKQRLIQTLTDKLNSVTRESLTGIRVVRAYNAESYQEDKFEKANTDLTQNNLFIG
RSFALLTPVMTAVSSGLTLAIYWIGAHLIEDVKIPTDPTKIAGAMENKVHLFSDMVVYSSYAMQVVMGFMMMIVVFFLLP
RAVVAASRINEVLDTQSSVSYPENSSEKPKEVGTVEFDDVSFRYSETSEPVLEHVSFKAKKGDTVAFIGSTGSGKSTLVN
LIPRFYDATQGTIKVDGVDVRHYDHETLHNIVGYIPQKAVLFSGDITSNMTMGTSNNSPLDDAKIWEALELAQGKDFVEN
KEGQLKAEVAQAGSNFSGGQKQRLAIARALARKPEILIFDDSFSALDYKTDRKLRQELAEKTQDMTKLIVAQRISTIMDA
DQILVLDQGKVVGQGTHKELLANNEVYQEIAYSQLSKEELENGK

Nucleotide


Download         Length: 1815 bp        

>NTDB_id=640142 LV497_RS06985 WP_038675388.1 1510943..1512757(+) (rcrP) [Streptococcus salivarius strain SALI-10]
ATGTTTAAAATTTTTAAACGTTTGACGACAAAAGAGTTAATCATGATTGTCTTAGCGGTGATTTTTGTTTGCTTGAACGT
CTATCTAAACTTGAAAATTCCAGACTATATGTCTGATATTACGACACTCTTATCAACTAAGGGAACTAAAGCGTCGGATA
TTTTTGCCTGGAATACAGATGCCCCAGGGATGCGAATGCTTTTAATGTCATTTGCAGGCTTTATGGCCTCTGTAGTTGTT
GGTTTCTTAGCTGCCAGAACAGCGGCAAGTTTTACCACCCGCCTTCGTGATGATATCTTCCATCAGGTTCTAGATTTTTC
GGATGCAGAGATCAAGAAATTCTCCATTCCTAGTCTTTTGACCCGTACGACAAATGATATTACCCAATTGCAGATGGTAC
TTACCATGGGGTTACAGGTTATTACACAGGGGCCTATCATGGCCATTTGGGCGATTACAAAGATTGCCGATAAAAATGGA
AATTGGCTCCTTGCCTTGCTTGTCGCTGTGGCAGTGATTGCCATTCTCATGCTTTTCCTCTTGATTATGGTTATGCCTAA
GCAACGCTTGATTCAAACGCTGACCGATAAACTGAATAGCGTAACGCGTGAATCTCTTACAGGAATTCGTGTGGTGCGTG
CCTATAACGCCGAAAGTTATCAAGAGGATAAATTTGAAAAGGCCAATACTGATTTGACCCAAAACAATCTCTTTATCGGT
CGTTCTTTTGCCTTACTGACACCGGTGATGACTGCTGTATCAAGTGGTTTGACACTGGCTATTTATTGGATTGGTGCACA
TTTGATTGAAGATGTTAAGATTCCAACAGATCCAACTAAGATTGCTGGTGCCATGGAAAATAAGGTCCATCTCTTCTCAG
ACATGGTGGTTTATTCATCTTATGCCATGCAGGTTGTTATGGGATTCATGATGATGATTGTTGTTTTCTTCCTTCTTCCA
CGTGCAGTTGTAGCAGCTAGTCGTATCAATGAAGTTCTAGATACCCAATCTTCAGTCTCTTATCCTGAAAATAGTTCTGA
AAAGCCTAAAGAAGTGGGTACTGTCGAATTTGATGATGTTTCCTTCCGTTATTCTGAAACTTCAGAGCCTGTTTTGGAGC
ATGTTAGCTTCAAAGCTAAAAAAGGTGACACGGTTGCCTTTATTGGTTCGACTGGATCTGGTAAATCAACGCTTGTCAAC
CTTATCCCACGTTTTTATGATGCCACGCAAGGAACGATCAAGGTTGACGGTGTCGATGTGCGACATTATGACCATGAAAC
CTTGCACAATATAGTCGGTTATATTCCACAGAAGGCTGTGCTTTTCTCAGGTGATATCACGTCAAATATGACGATGGGAA
CGAGCAATAACAGTCCCCTTGATGATGCTAAGATTTGGGAAGCTCTCGAATTGGCTCAAGGAAAAGACTTTGTTGAAAAT
AAAGAAGGTCAACTTAAAGCAGAAGTTGCCCAAGCTGGGTCTAACTTCTCAGGTGGACAGAAGCAACGTTTGGCTATTGC
GCGTGCCTTGGCACGTAAGCCTGAAATCTTGATTTTCGATGATTCCTTCTCAGCCTTGGATTATAAGACCGATCGTAAGT
TACGTCAAGAATTGGCTGAAAAAACACAAGATATGACCAAGTTGATTGTTGCCCAACGTATCTCTACTATTATGGATGCG
GACCAAATCTTGGTACTTGACCAAGGTAAGGTCGTTGGTCAAGGAACTCACAAGGAACTCTTGGCAAATAATGAGGTTTA
CCAAGAAATTGCCTATTCACAATTGTCTAAGGAGGAGTTAGAAAATGGAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A448A7C5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

68.264

100

0.684