Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   N6J21_RS21720 Genome accession   NZ_CP104794
Coordinates   4847855..4848979 (-) Length   374 a.a.
NCBI ID   WP_093723497.1    Uniprot ID   A0ABT7IT56
Organism   Streptomyces sp. FZ201     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 4842855..4853979
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N6J21_RS21695 - 4843725..4844408 (-) 684 WP_093723493.1 hypothetical protein -
  N6J21_RS21700 - 4844396..4844935 (-) 540 WP_093723516.1 SigE family RNA polymerase sigma factor -
  N6J21_RS21705 - 4845136..4846062 (-) 927 WP_093723494.1 A/G-specific adenine glycosylase -
  N6J21_RS21710 - 4846272..4846844 (+) 573 WP_261719122.1 DUF4352 domain-containing protein -
  N6J21_RS21715 - 4847018..4847839 (+) 822 WP_261719123.1 hypothetical protein -
  N6J21_RS21720 disA 4847855..4848979 (-) 1125 WP_093723497.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  N6J21_RS21725 radA 4849061..4850470 (-) 1410 WP_093723498.1 DNA repair protein RadA Machinery gene
  N6J21_RS21730 - 4850655..4852409 (+) 1755 WP_261719124.1 hypothetical protein -
  N6J21_RS21735 - 4852413..4853264 (-) 852 WP_250754497.1 hypothetical protein -

Sequence

Protein


Download         Length: 374 a.a.        Molecular weight: 39998.76 Da        Isoelectric Point: 4.9201

>NTDB_id=633347 N6J21_RS21720 WP_093723497.1 4847855..4848979(-) (disA) [Streptomyces sp. FZ201]
MAANDRAAAPGKAGGSSGADGLMRASLSAVAPGTALRDGLERILRGNTGGLIVLGSDKTVEAMCTGGFVLDVEFTATRLR
ELCKLDGGIVLSSDLSKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALYELDALSHAELLELPTVAKALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=633347 N6J21_RS21720 WP_093723497.1 4847855..4848979(-) (disA) [Streptomyces sp. FZ201]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGGCCGGTGGGAGCTCCGGTGCCGATGGCCTGATGCGCGCCTCACT
GAGCGCCGTGGCACCGGGCACGGCGCTGCGCGACGGCCTTGAACGGATCCTCCGGGGCAACACCGGCGGGCTCATCGTGC
TGGGCTCGGACAAGACCGTCGAGGCGATGTGCACGGGCGGTTTCGTCCTGGATGTCGAGTTCACGGCGACCCGGCTCCGG
GAGCTGTGCAAGCTCGACGGCGGCATCGTGCTCTCCTCGGACCTGTCGAAGATCCTGCGCGCGGGCGTGCAGCTGGTCCC
GGACCCGACGATCCCCACCGAGGAGACGGGCACCCGGCACCGCACGGCGGACCGGGTCAGCAAGCAGGTCGGCTTCCCCG
TCGTCTCCGTCTCCCAGTCGATGCGCCTGATCGCGCTCTACGTCGACGGGCAGCGGCGGGTGCTGGAGGACTCCGCGGCG
ATCCTGTCCCGCGCGAACCAGGCGCTGGCGACGCTGGAGCGGTACAAGCTGCGGCTGGACGAGGTGGCGGGCACGCTGTC
CGCGCTGGAGATCGAGGACCTGGTAACGGTCCGGGACGTCTCCGCGGTGGCGCAGCGCCTGGAGATGGTCCGCCGGATCG
CCACCGAGATCGCCGAGTACGTGGTGGAGCTGGGCACCGACGGACGGCTGCTCGCGCTCCAGCTCGACGAGCTGATCGCG
GGCGTGGAGCCGGAGCGGGAACTGGTCGTACGGGACTATGTGCCCGAGCCGACGGCGAAGCGGTCCCGCACGGTCGACGA
GGCGCTGTACGAGCTGGACGCGCTCAGCCACGCGGAGCTGCTGGAACTGCCCACGGTGGCGAAGGCCTTGGGGTACACCG
GGTCTCCGGAGGCGCTGGACTCGGCGGTGTCGCCGCGCGGGTTCCGGCTGCTGGCGAAGGTGCCGCGACTGCCGGGCGCC
ATCATCGACCGGCTGGTGGAGCACTTCGGGGGCCTGCAGAAGCTGCTCGCCGCGAGCGTCGACGACCTCCAGACGGTGGA
CGGCGTCGGCGAGGCCCGCGCGCGCAGCGTGCGCGAGGGCCTGTCCCGGCTGGCGGAGTCCTCGATCCTGGAGCGCTACG
TCTGA

Domains

Predicted by InterProScan.

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(38-151)

Helix-hairpin-helix motif (HHH_2)

(324-359)

DisA bacterial checkpoint controller linker region (DisA-linker)

(155-297)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.983

96.524

0.444