Detailed information
Bioinformatically predicted
Overview
| Name | rapC | Type | Regulator |
| Locus tag | N0B18_RS03860 | Genome accession | NZ_CP103995 |
| Coordinates | 749369..750499 (+) | Length | 376 a.a. |
| NCBI ID | WP_069964032.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain SRCM117109 | ||
| Function | inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 744369..755499
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N0B18_RS03840 (N0B18_03840) | - | 744688..744885 (-) | 198 | WP_014479085.1 | hypothetical protein | - |
| N0B18_RS03845 (N0B18_03845) | - | 745484..745957 (-) | 474 | WP_014479086.1 | immunity protein YezG family protein | - |
| N0B18_RS03850 (N0B18_03850) | yeeF | 745962..747971 (-) | 2010 | WP_069964031.1 | LXG family T7SS effector deoxyribonuclease toxin YeeF | - |
| N0B18_RS03855 (N0B18_03855) | - | 748183..749206 (+) | 1024 | Protein_708 | hypothetical protein | - |
| N0B18_RS03860 (N0B18_03860) | rapC | 749369..750499 (+) | 1131 | WP_069964032.1 | response regulator aspartate phosphatase RapH | Regulator |
| N0B18_RS03865 (N0B18_03865) | phrH | 750489..750662 (+) | 174 | WP_003242557.1 | phosphatase RapH inhibitor PhrH | - |
| N0B18_RS03870 (N0B18_03870) | yeeI | 750822..751541 (+) | 720 | WP_003233863.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| N0B18_RS03875 (N0B18_03875) | - | 751675..752169 (+) | 495 | WP_069964033.1 | spore coat protein | - |
| N0B18_RS03880 (N0B18_03880) | yezE | 752284..752868 (+) | 585 | WP_014479093.1 | TetR/AcrR family transcriptional regulator | - |
| N0B18_RS03885 (N0B18_03885) | yesE | 752947..753390 (+) | 444 | WP_069964034.1 | nuclear transport factor 2 family protein | - |
| N0B18_RS03890 (N0B18_03890) | yesF | 753387..754255 (+) | 869 | Protein_715 | NAD-dependent epimerase/dehydratase family protein | - |
| N0B18_RS03895 (N0B18_03895) | cotJA | 754381..754629 (+) | 249 | WP_003219489.1 | spore coat-associated protein CotJA | - |
| N0B18_RS03900 (N0B18_03900) | cotJB | 754613..754876 (+) | 264 | WP_003219491.1 | spore coat protein CotJB | - |
| N0B18_RS03905 (N0B18_03905) | cotJC | 754891..755460 (+) | 570 | WP_003233850.1 | spore coat protein CotJC | - |
Sequence
Protein
Download Length: 376 a.a. Molecular weight: 44129.48 Da Isoelectric Point: 5.9938
>NTDB_id=626201 N0B18_RS03860 WP_069964032.1 749369..750499(+) (rapC) [Bacillus subtilis strain SRCM117109]
MSQAIPSSRVGVKINEWYKMIRQFSVPDAEVLKAEVEQDIQQMEEDQDLLIYYSLMCFRHQLMLDYLEPRQPYGNRPTVT
ELLETIETPQKKLTGLLKYYSLFFRGMYEFDQKEYVEAIGYYREAEKELPFVSDEIEKAEFHFKVAEAYYHMKQTHVSMH
HILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEKALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAV
EHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARSHKFYKELFLFLQAVYKETVDERKIHDL
LSYFEKKNLHAYIEACARSAAAVFESSCHFEQAAAFYRKVLKAQEDILKGECLYAY
MSQAIPSSRVGVKINEWYKMIRQFSVPDAEVLKAEVEQDIQQMEEDQDLLIYYSLMCFRHQLMLDYLEPRQPYGNRPTVT
ELLETIETPQKKLTGLLKYYSLFFRGMYEFDQKEYVEAIGYYREAEKELPFVSDEIEKAEFHFKVAEAYYHMKQTHVSMH
HILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEKALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAV
EHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARSHKFYKELFLFLQAVYKETVDERKIHDL
LSYFEKKNLHAYIEACARSAAAVFESSCHFEQAAAFYRKVLKAQEDILKGECLYAY
Nucleotide
Download Length: 1131 bp
>NTDB_id=626201 N0B18_RS03860 WP_069964032.1 749369..750499(+) (rapC) [Bacillus subtilis strain SRCM117109]
TTGAGTCAAGCCATACCGTCTTCGCGTGTGGGTGTTAAGATTAATGAATGGTATAAAATGATTCGCCAGTTCAGTGTTCC
GGATGCTGAGGTTCTGAAAGCGGAGGTGGAGCAGGACATTCAGCAAATGGAAGAAGACCAGGATTTGCTGATCTATTATT
CTCTGATGTGTTTTCGGCACCAGCTGATGCTGGATTATTTGGAGCCGAGACAGCCTTACGGGAATCGCCCTACAGTGACA
GAACTTTTGGAAACAATTGAGACCCCTCAGAAAAAACTCACAGGCCTTTTGAAATATTACTCTTTGTTTTTCCGCGGCAT
GTATGAATTTGACCAAAAAGAATATGTGGAAGCGATCGGGTATTATCGCGAGGCGGAGAAAGAACTGCCGTTTGTGTCAG
ATGAAATTGAGAAAGCGGAATTCCATTTTAAAGTGGCCGAAGCGTATTATCACATGAAGCAAACCCATGTGTCGATGCAT
CATATTCTTCAAGCCTTAGACATTTATCAAAACCATCCCTTATACAGCATTAGAACGATACAAAGCTTGTTTGTGATCGC
CGGCAACTATGATGATTTCAAACATTATGATAAAGCGCTCCCGCATTTAGAAAAGGCGCTGGAATTGGCCATGGACATTC
AAAATGACAGGTTTATCGCCATTTCTCTATTGAACATCGCGAACAGCTATGACAGATCAGGAGACGATCAGATGGCTGTA
GAACATTTCCAAAAAGCGGCGAAAGTAAGCAGAGAGAAAGTGCCTGATCTGCTTCCGAAAGTCTTGTTTGGATTAAGCTG
GACATTATGTAAAGCGGGCCAAACACAGAAGGCGTTTCAGTTCATAGAGGAAGGATTAGACCATATCACAGCACGTTCTC
ACAAATTTTATAAAGAATTGTTTCTGTTCTTGCAGGCCGTGTACAAGGAGACTGTTGATGAACGAAAAATTCATGATCTT
TTAAGCTATTTCGAAAAAAAGAACCTGCACGCTTACATTGAAGCATGTGCCCGGAGTGCTGCCGCTGTTTTTGAAAGCAG
CTGTCACTTTGAACAAGCCGCTGCGTTTTATCGGAAAGTGCTGAAAGCCCAAGAAGATATTCTAAAAGGAGAGTGTTTAT
ATGCCTATTAA
TTGAGTCAAGCCATACCGTCTTCGCGTGTGGGTGTTAAGATTAATGAATGGTATAAAATGATTCGCCAGTTCAGTGTTCC
GGATGCTGAGGTTCTGAAAGCGGAGGTGGAGCAGGACATTCAGCAAATGGAAGAAGACCAGGATTTGCTGATCTATTATT
CTCTGATGTGTTTTCGGCACCAGCTGATGCTGGATTATTTGGAGCCGAGACAGCCTTACGGGAATCGCCCTACAGTGACA
GAACTTTTGGAAACAATTGAGACCCCTCAGAAAAAACTCACAGGCCTTTTGAAATATTACTCTTTGTTTTTCCGCGGCAT
GTATGAATTTGACCAAAAAGAATATGTGGAAGCGATCGGGTATTATCGCGAGGCGGAGAAAGAACTGCCGTTTGTGTCAG
ATGAAATTGAGAAAGCGGAATTCCATTTTAAAGTGGCCGAAGCGTATTATCACATGAAGCAAACCCATGTGTCGATGCAT
CATATTCTTCAAGCCTTAGACATTTATCAAAACCATCCCTTATACAGCATTAGAACGATACAAAGCTTGTTTGTGATCGC
CGGCAACTATGATGATTTCAAACATTATGATAAAGCGCTCCCGCATTTAGAAAAGGCGCTGGAATTGGCCATGGACATTC
AAAATGACAGGTTTATCGCCATTTCTCTATTGAACATCGCGAACAGCTATGACAGATCAGGAGACGATCAGATGGCTGTA
GAACATTTCCAAAAAGCGGCGAAAGTAAGCAGAGAGAAAGTGCCTGATCTGCTTCCGAAAGTCTTGTTTGGATTAAGCTG
GACATTATGTAAAGCGGGCCAAACACAGAAGGCGTTTCAGTTCATAGAGGAAGGATTAGACCATATCACAGCACGTTCTC
ACAAATTTTATAAAGAATTGTTTCTGTTCTTGCAGGCCGTGTACAAGGAGACTGTTGATGAACGAAAAATTCATGATCTT
TTAAGCTATTTCGAAAAAAAGAACCTGCACGCTTACATTGAAGCATGTGCCCGGAGTGCTGCCGCTGTTTTTGAAAGCAG
CTGTCACTTTGAACAAGCCGCTGCGTTTTATCGGAAAGTGCTGAAAGCCCAAGAAGATATTCTAAAAGGAGAGTGTTTAT
ATGCCTATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rapC | Bacillus subtilis subsp. subtilis str. 168 |
40.957 |
100 |
0.41 |
| rapF | Bacillus subtilis subsp. subtilis str. 168 |
40.318 |
100 |
0.404 |