Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | SA40_RS07545 | Genome accession | NC_022443 |
| Coordinates | 1563856..1564155 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus subsp. aureus SA40 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1558856..1569155
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SA40_RS07520 (SA40_1407) | gcvPA | 1560068..1561414 (-) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| SA40_RS07525 (SA40_1408) | gcvT | 1561434..1562525 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| SA40_RS07530 (SA40_1409) | - | 1562684..1563208 (-) | 525 | WP_001015116.1 | shikimate kinase | - |
| SA40_RS07535 | - | 1563198..1563344 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| SA40_RS07540 (SA40_1410) | comGF | 1563441..1563938 (-) | 498 | WP_001838632.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| SA40_RS07545 (SA40_1411) | comGE | 1563856..1564155 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| SA40_RS07550 (SA40_1412) | comGD | 1564142..1564588 (-) | 447 | WP_001796473.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| SA40_RS07555 (SA40_1413) | comGC | 1564566..1564877 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| SA40_RS07560 (SA40_1414) | comGB | 1564891..1565961 (-) | 1071 | WP_000776407.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| SA40_RS07565 (SA40_1415) | comGA | 1565933..1566907 (-) | 975 | WP_000697218.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| SA40_RS07570 (SA40_1416) | - | 1566959..1567582 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| SA40_RS07575 (SA40_1417) | - | 1567579..1567908 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| SA40_RS07580 (SA40_1418) | - | 1567908..1568894 (-) | 987 | WP_000161315.1 | ROK family glucokinase | - |
| SA40_RS07585 (SA40_1419) | - | 1568891..1569094 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=62397 SA40_RS07545 WP_000844413.1 1563856..1564155(-) (comGE) [Staphylococcus aureus subsp. aureus SA40]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=62397 SA40_RS07545 WP_000844413.1 1563856..1564155(-) (comGE) [Staphylococcus aureus subsp. aureus SA40]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAGCTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAGCTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |