Detailed information NTG0062325

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: FNP71_RS06375
• Genome accession: NZ_AP019714
• Coordinates: 1222130..1223047 (+)
• Length: 305 a.a.
• NCBI ID: WP_003232954.1
• Uniprot ID: A0A9W5LHY5
• Organism: Bacillus subtilis subsp. subtilis strain NBRC 13719
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1217130..1228047

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FNP71_RS06360 (NBRC13719_11560)	trpS	1217710..1218702 (-)	993	WP_003245134.1	tryptophan--tRNA ligase	-
FNP71_RS06365 (NBRC13719_11570)	oppA	1219446..1221083 (+)	1638	WP_142167376.1	oligopeptide ABC transporter substrate-binding protein OppA	-
FNP71_RS06370 (NBRC13719_11580)	oppB	1221191..1222126 (+)	936	WP_003245554.1	oligopeptide ABC transporter permease OppB	-
FNP71_RS06375 (NBRC13719_11590)	amiD	1222130..1223047 (+)	918	WP_003232954.1	oligopeptide ABC transporter permease OppC	Regulator
FNP71_RS06380 (NBRC13719_11600)	oppD	1223052..1224128 (+)	1077	WP_014906294.1	oligopeptide ABC transporter ATP-binding protein OppD	-
FNP71_RS06385 (NBRC13719_11610)	oppF	1224130..1225047 (+)	918	WP_003245567.1	oligopeptide ABC transporter ATP-binding protein OppF	-
FNP71_RS06390 (NBRC13719_11620)	yjbB	1225154..1226371 (+)	1218	WP_010886478.1	MFS transporter	-
FNP71_RS06395 (NBRC13719_11630)	yjbC	1226535..1227113 (+)	579	WP_003244921.1	GNAT family N-acetyltransferase	-
FNP71_RS06400 (NBRC13719_11640)	spx	1227294..1227689 (+)	396	WP_003245483.1	transcriptional regulator Spx	-

Sequence

Protein

• Length: 305 a.a.
• Molecular weight: 33621.12 Da
• Isoelectric Point: 10.2873

>NTDB_id=62325 FNP71_RS06375 WP_003232954.1 1222130..1223047(+) (amiD) [Bacillus subtilis subsp. subtilis strain NBRC 13719]
MQNIPKNMFEPAAANAGDAEKISKKSLSLWKDAMLRFRSNKLAMVGLIIIVLIILMAIFAPMFSRYDYSTTNLLNADKPP
SKDHWFGTDDLGRDIFVRTWVGARISIFIGVAAAVLDLLIGVIWGSISGFRGGRTDEIMMRIADILWAVPSLLMVILLMV
VLPKGLFTIIIAMTITGWINMARIVRGQVLQLKNQEYVLASQTLGAKTSRLLFKHIVPNAMGSILVTMTLTVPTAIFTEA
FLSYLGLGVPAPLASWGTMASDGLPALTYYPWRLFFPAGFICITMFGFNVVGDGLRDALDPKLRK

Nucleotide

• Length: 918 bp

>NTDB_id=62325 FNP71_RS06375 WP_003232954.1 1222130..1223047(+) (amiD) [Bacillus subtilis subsp. subtilis strain NBRC 13719]
ATGCAGAACATTCCAAAAAACATGTTTGAACCAGCCGCAGCGAATGCCGGCGATGCAGAAAAAATAAGTAAAAAGAGCCT
TTCCCTCTGGAAAGATGCGATGCTTCGCTTCCGCAGCAATAAGCTTGCAATGGTCGGGCTTATCATTATCGTACTTATTA
TCCTTATGGCAATTTTTGCGCCGATGTTCTCAAGGTATGATTATTCAACTACTAATCTCTTAAATGCGGATAAGCCGCCT
TCAAAAGATCACTGGTTCGGAACAGATGATCTTGGACGGGACATTTTCGTCCGTACATGGGTAGGGGCGCGAATCTCAAT
CTTTATCGGTGTTGCAGCTGCTGTTCTCGATTTGCTGATCGGCGTCATTTGGGGGAGCATTTCAGGCTTCCGCGGAGGAA
GAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATGGTTATCTTACTGATGGTT
GTTCTTCCGAAAGGTCTATTTACGATTATTATTGCCATGACGATTACAGGCTGGATTAATATGGCCAGAATCGTGCGCGG
ACAAGTGCTGCAGCTGAAGAATCAGGAGTATGTGCTTGCTTCACAGACACTGGGTGCAAAAACATCCCGTCTTCTATTTA
AACATATCGTGCCAAACGCAATGGGTTCTATTTTGGTCACGATGACACTGACAGTTCCTACTGCGATTTTTACAGAAGCC
TTTTTAAGCTATTTGGGACTTGGTGTTCCGGCTCCGCTGGCAAGCTGGGGAACGATGGCTTCTGACGGATTGCCTGCATT
GACCTATTATCCGTGGCGTTTATTCTTCCCTGCCGGATTTATCTGCATTACAATGTTTGGTTTTAACGTTGTCGGCGACG
GATTAAGAGACGCATTGGATCCTAAGTTACGTAAATAA

Domains

Predicted by InterProScan.

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (121-305)

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-79)

3D structure

• AlphaFold DB: A0A9W5LHY5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus thermophilus LMG 18311	35.922	100	0.364
amiD	Streptococcus thermophilus LMD-9	35.922	100	0.364