Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   LIT30_RS03540 Genome accession   NZ_CP085426
Coordinates   670852..671046 (+) Length   64 a.a.
NCBI ID   WP_029324748.1    Uniprot ID   A0A2B0NED9
Organism   Priestia megaterium strain F16     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 665852..676046
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LIT30_RS03515 (LIT30_03520) galT 665915..667438 (+) 1524 WP_013055398.1 UDP-glucose--hexose-1-phosphate uridylyltransferase -
  LIT30_RS03520 (LIT30_03525) - 667481..668365 (-) 885 WP_098325913.1 NAD(P)-dependent oxidoreductase -
  LIT30_RS03525 (LIT30_03530) - 668569..668757 (-) 189 WP_013055400.1 YjzD family protein -
  LIT30_RS03530 (LIT30_03535) - 668967..669707 (+) 741 WP_053486828.1 hypothetical protein -
  LIT30_RS03535 (LIT30_03540) - 669889..670773 (+) 885 WP_013055402.1 NAD(P)-dependent oxidoreductase -
  LIT30_RS03540 (LIT30_03545) comZ 670852..671046 (+) 195 WP_029324748.1 ComZ family protein Regulator
  LIT30_RS03545 (LIT30_03550) - 671075..671275 (-) 201 WP_029324750.1 hypothetical protein -
  LIT30_RS03550 (LIT30_03555) - 671532..672470 (+) 939 WP_013055404.1 beta-ketoacyl-ACP synthase III -
  LIT30_RS03555 (LIT30_03560) fabF 672510..673751 (+) 1242 WP_013055405.1 beta-ketoacyl-ACP synthase II -
  LIT30_RS03560 (LIT30_03565) - 673857..674630 (+) 774 WP_013055406.1 DUF2268 domain-containing putative Zn-dependent protease -
  LIT30_RS03565 (LIT30_03570) - 674857..675879 (+) 1023 WP_252298711.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 64 a.a.        Molecular weight: 7330.37 Da        Isoelectric Point: 3.9484

>NTDB_id=618012 LIT30_RS03540 WP_029324748.1 670852..671046(+) (comZ) [Priestia megaterium strain F16]
MEEQNMQFMQIAMKYLPEAKQILDETGVELSMEHVQPVLTLLTKVMSDAYELGKQDALAENENN

Nucleotide


Download         Length: 195 bp        

>NTDB_id=618012 LIT30_RS03540 WP_029324748.1 670852..671046(+) (comZ) [Priestia megaterium strain F16]
ATGGAAGAGCAAAATATGCAATTCATGCAAATTGCAATGAAGTACTTGCCAGAAGCAAAGCAGATCTTAGATGAAACAGG
CGTTGAGTTATCAATGGAACACGTGCAGCCGGTATTGACATTACTAACAAAAGTAATGAGCGACGCCTATGAGCTTGGCA
AGCAAGATGCATTAGCTGAAAATGAAAACAACTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2B0NED9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

60

93.75

0.563