Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   LIS79_RS07175 Genome accession   NZ_CP085389
Coordinates   1388293..1388754 (-) Length   153 a.a.
NCBI ID   WP_007498684.1    Uniprot ID   A0A9X0FXQ0
Organism   Bacillus altitudinis strain CMF5     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1383293..1393754
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LIS79_RS07150 (LIS79_07150) - 1383694..1384578 (+) 885 WP_017359428.1 cation diffusion facilitator family transporter -
  LIS79_RS07155 (LIS79_07155) - 1384643..1384795 (-) 153 WP_017367142.1 hypothetical protein -
  LIS79_RS07160 (LIS79_07160) - 1385096..1385635 (+) 540 WP_074042058.1 RDD family protein -
  LIS79_RS07165 (LIS79_07165) - 1385761..1387071 (+) 1311 WP_007498688.1 MFS transporter -
  LIS79_RS07170 (LIS79_07170) - 1387145..1388053 (+) 909 WP_008348035.1 chemotaxis protein -
  LIS79_RS07175 (LIS79_07175) kre 1388293..1388754 (-) 462 WP_007498684.1 YkyB family protein Regulator
  LIS79_RS07180 (LIS79_07180) - 1389231..1389446 (-) 216 WP_008348016.1 hypothetical protein -
  LIS79_RS07185 (LIS79_07185) - 1389611..1389787 (+) 177 WP_252225077.1 hypothetical protein -
  LIS79_RS07190 (LIS79_07190) - 1390012..1391289 (-) 1278 WP_046343422.1 MFS transporter -
  LIS79_RS07195 (LIS79_07195) - 1391363..1391860 (-) 498 WP_074042057.1 L,D-transpeptidase family protein -
  LIS79_RS07200 (LIS79_07200) - 1392017..1392874 (-) 858 WP_074042056.1 metallophosphoesterase -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17739.31 Da        Isoelectric Point: 10.2617

>NTDB_id=617340 LIS79_RS07175 WP_007498684.1 1388293..1388754(-) (kre) [Bacillus altitudinis strain CMF5]
MDDYAHTKDIEPTAENIAKAIYTVNRHAKTAPNPKFLYLLKKRALQKLLQEGKGRKVGLHFSNNPRYSQQQSDVLIEIGD
YYFHLPPTKEDFEFLPHLGNLNQSYRNPKANMSLNRAKQILQTYVGLKEKPAATKQKSHYTKPVFKRLGESYF

Nucleotide


Download         Length: 462 bp        

>NTDB_id=617340 LIS79_RS07175 WP_007498684.1 1388293..1388754(-) (kre) [Bacillus altitudinis strain CMF5]
ATGGACGATTATGCTCATACTAAAGACATAGAACCTACAGCAGAAAACATCGCAAAAGCCATTTATACTGTTAACCGCCA
TGCTAAAACCGCACCAAATCCCAAGTTTCTTTATCTTTTGAAAAAACGTGCGCTGCAAAAACTATTGCAAGAAGGTAAAG
GAAGAAAAGTGGGCCTACATTTCTCTAACAATCCCAGATATAGTCAACAACAGTCCGACGTGCTGATTGAAATCGGAGAT
TATTATTTTCATCTGCCACCAACTAAAGAAGACTTCGAATTTTTGCCACACTTAGGAAATTTAAATCAATCATATCGCAA
TCCGAAAGCGAATATGTCATTAAATCGAGCAAAACAAATACTTCAAACGTATGTCGGTTTAAAAGAAAAACCTGCCGCCA
CAAAACAAAAATCACATTATACAAAACCCGTCTTCAAACGGCTCGGGGAAAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

76.623

100

0.771