Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   LG319_RS01400 Genome accession   NZ_CP085027
Coordinates   287008..287904 (+) Length   298 a.a.
NCBI ID   WP_053024587.1    Uniprot ID   -
Organism   Staphylococcus haemolyticus strain SLM-175     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 282008..292904
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LG319_RS01375 (LG319_01375) - 282889..283824 (+) 936 WP_110708891.1 LCP family protein -
  LG319_RS01380 (LG319_01380) - 283914..285389 (-) 1476 WP_016930640.1 alkaline phosphatase -
  LG319_RS01385 (LG319_01385) - 285787..285957 (+) 171 WP_180529094.1 hypothetical protein -
  LG319_RS01390 (LG319_01390) - 286143..286307 (+) 165 WP_016930641.1 hypothetical protein -
  LG319_RS01395 (LG319_01395) braR 286337..287005 (+) 669 WP_053024588.1 response regulator transcription factor Regulator
  LG319_RS01400 (LG319_01400) braS 287008..287904 (+) 897 WP_053024587.1 sensor histidine kinase Regulator
  LG319_RS01405 (LG319_01405) - 288079..288828 (+) 750 WP_053024586.1 ABC transporter ATP-binding protein -
  LG319_RS01410 (LG319_01410) - 288830..290821 (+) 1992 WP_053024585.1 ABC transporter permease -
  LG319_RS01415 (LG319_01415) - 290911..291915 (+) 1005 WP_053024584.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 298 a.a.        Molecular weight: 34832.38 Da        Isoelectric Point: 6.7250

>NTDB_id=614711 LG319_RS01400 WP_053024587.1 287008..287904(+) (braS) [Staphylococcus haemolyticus strain SLM-175]
MLKAFIKSILNEIIIVITFILLFLLIFFLFNLPLNAYLLGAGIMLFIMIIYWLVQLSGFREQVQMRDIIHELEHELQQVK
SDQTEYQANVENYFLTWVHQMKTPITASKLLLERNEDNVVNRVRQEIIQIDNYTSLALSYLKLMNQETDMSFSKVKINDL
VHPLIMKYSIQFIDQKTKIHYERYEDEVLTDAQWCSIMIEQILNNALKYARGKDIWITFDQQQHVLTIRDNGVGISQADL
PKIFDKGYSGYNGRLNANSSGIGLFIVKHISQHLHHHVDVQSELNKGTAFSIYFPKNN

Nucleotide


Download         Length: 897 bp        

>NTDB_id=614711 LG319_RS01400 WP_053024587.1 287008..287904(+) (braS) [Staphylococcus haemolyticus strain SLM-175]
ATGCTGAAAGCTTTTATTAAATCAATATTAAATGAAATTATTATAGTTATCACATTTATATTATTATTTTTACTTATCTT
CTTTCTATTTAATTTGCCACTGAATGCGTATCTATTAGGTGCGGGAATAATGCTGTTCATCATGATAATTTATTGGTTAG
TACAATTAAGTGGGTTTAGAGAACAAGTTCAGATGAGAGACATTATTCATGAACTAGAACATGAATTGCAACAGGTGAAA
AGTGATCAAACTGAATATCAAGCTAATGTGGAGAATTACTTCTTAACGTGGGTTCATCAAATGAAGACGCCTATTACAGC
ATCTAAATTATTGTTAGAGCGTAATGAAGATAATGTCGTCAATCGAGTGCGGCAAGAAATTATCCAAATTGATAATTATA
CAAGTTTAGCGTTAAGTTATTTAAAATTGATGAACCAAGAAACGGATATGTCCTTTTCAAAAGTAAAGATTAATGACCTT
GTCCATCCATTAATTATGAAATATTCTATTCAATTTATTGATCAGAAGACAAAGATTCATTATGAACGGTATGAGGATGA
AGTTCTGACTGATGCACAATGGTGTTCGATCATGATTGAACAGATTCTAAATAATGCATTGAAGTATGCGCGAGGTAAGG
ACATTTGGATTACGTTTGACCAACAACAGCATGTATTGACTATTCGTGATAATGGTGTCGGTATTAGTCAAGCTGACTTA
CCGAAGATCTTTGATAAAGGCTATTCAGGATATAATGGTCGATTGAATGCTAATTCATCAGGCATTGGATTGTTTATTGT
TAAACATATCTCTCAACATTTACATCATCATGTAGATGTACAGTCTGAGTTGAACAAAGGTACGGCATTTAGTATTTATT
TCCCGAAAAATAATTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(197-296)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

62.671

97.987

0.614