Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | LD199_RS05345 | Genome accession | NZ_CP084878 |
| Coordinates | 1079439..1079738 (+) | Length | 99 a.a. |
| NCBI ID | WP_000844410.1 | Uniprot ID | A0A7R6NZL1 |
| Organism | Staphylococcus aureus strain GS426 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1074439..1084738
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LD199_RS05305 (LD199_05305) | - | 1074500..1074703 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| LD199_RS05310 (LD199_05310) | - | 1074700..1075686 (+) | 987 | WP_000161311.1 | ROK family glucokinase | - |
| LD199_RS05315 (LD199_05315) | - | 1075686..1076015 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| LD199_RS05320 (LD199_05320) | - | 1076012..1076635 (+) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| LD199_RS05325 (LD199_05325) | comGA | 1076687..1077661 (+) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| LD199_RS05330 (LD199_05330) | comGB | 1077633..1078703 (+) | 1071 | WP_000776422.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| LD199_RS05335 (LD199_05335) | comGC | 1078717..1079028 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| LD199_RS05340 (LD199_05340) | comGD | 1079006..1079452 (+) | 447 | WP_001788899.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| LD199_RS05345 (LD199_05345) | comGE | 1079439..1079738 (+) | 300 | WP_000844410.1 | hypothetical protein | Machinery gene |
| LD199_RS05350 (LD199_05350) | comGF | 1079656..1080153 (+) | 498 | WP_001788897.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| LD199_RS05355 (LD199_05355) | - | 1080250..1080396 (+) | 147 | WP_001792109.1 | hypothetical protein | - |
| LD199_RS05360 (LD199_05360) | - | 1080386..1080910 (+) | 525 | WP_001015120.1 | shikimate kinase | - |
| LD199_RS05365 (LD199_05365) | gcvT | 1081069..1082160 (+) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| LD199_RS05370 (LD199_05370) | gcvPA | 1082180..1083526 (+) | 1347 | WP_000019691.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11079.18 Da Isoelectric Point: 9.9215
>NTDB_id=613741 LD199_RS05345 WP_000844410.1 1079439..1079738(+) (comGE) [Staphylococcus aureus strain GS426]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQSIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQSIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=613741 LD199_RS05345 WP_000844410.1 1079439..1079738(+) (comGE) [Staphylococcus aureus strain GS426]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAATCAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAATCAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus N315 |
100 |
100 |
1 |
| comGE | Staphylococcus aureus MW2 |
85.965 |
100 |
0.99 |