Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   NLY75_RS10585 Genome accession   NZ_CP100432
Coordinates   2097250..2097699 (-) Length   149 a.a.
NCBI ID   WP_012027921.1    Uniprot ID   G9CHX9
Organism   Streptococcus suis T15     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2092250..2102699
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NLY75_RS10565 (NLY75_10565) - 2092682..2093214 (-) 533 Protein_2046 histidine phosphatase family protein -
  NLY75_RS10570 (NLY75_10570) - 2093221..2093664 (-) 444 WP_023371714.1 dUTP diphosphatase -
  NLY75_RS10575 (NLY75_10575) - 2093766..2095550 (-) 1785 WP_023371716.1 ABC transporter ATP-binding protein -
  NLY75_RS10580 (NLY75_10580) - 2095551..2097257 (-) 1707 WP_023371717.1 ABC transporter ATP-binding protein -
  NLY75_RS10585 (NLY75_10585) rcrR 2097250..2097699 (-) 450 WP_012027921.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  NLY75_RS10590 (NLY75_10590) - 2097921..2098937 (+) 1017 WP_023371719.1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase -
  NLY75_RS10595 (NLY75_10595) galU 2098953..2099855 (+) 903 WP_023371721.1 UTP--glucose-1-phosphate uridylyltransferase GalU -
  NLY75_RS10600 (NLY75_10600) - 2099873..2100550 (-) 678 WP_023371723.1 rhomboid family intramembrane serine protease -
  NLY75_RS10605 (NLY75_10605) - 2100534..2101076 (-) 543 Protein_2054 5-formyltetrahydrofolate cyclo-ligase -
  NLY75_RS10610 (NLY75_10610) - 2101117..2102244 (-) 1128 WP_023371725.1 N-acetyldiaminopimelate deacetylase -

Sequence

Protein


Download         Length: 149 a.a.        Molecular weight: 17284.90 Da        Isoelectric Point: 8.9142

>NTDB_id=605243 NLY75_RS10585 WP_012027921.1 2097250..2097699(-) (rcrR) [Streptococcus suis T15]
MGHTIADFRNLLNQIEQISETIAKEYDVEHLAGPQGWALRFIAERSEAETFVKDIEAELKISKSVASNLVKRMEKNGFIQ
VLPSKVDKRFKQLVLTEKGQGKICHLKAFHEEMHHSLFWGIQKEDFDLVKQVGNQLKVNIQRYKEKNHV

Nucleotide


Download         Length: 450 bp        

>NTDB_id=605243 NLY75_RS10585 WP_012027921.1 2097250..2097699(-) (rcrR) [Streptococcus suis T15]
GTGGGACATACCATTGCAGATTTTCGGAACTTGCTCAATCAGATTGAACAAATTAGTGAAACCATTGCAAAAGAATACGA
TGTGGAGCACTTGGCTGGTCCACAGGGCTGGGCCTTGCGTTTCATTGCGGAACGGTCGGAAGCCGAAACCTTTGTAAAAG
ATATAGAAGCGGAATTAAAGATTTCCAAATCCGTTGCCAGCAATCTGGTCAAGAGAATGGAGAAAAATGGCTTTATCCAA
GTCCTTCCCTCTAAGGTTGACAAACGCTTCAAACAGCTGGTTTTGACAGAGAAGGGACAAGGGAAGATATGTCACCTGAA
AGCTTTTCATGAAGAAATGCACCATTCACTTTTTTGGGGCATTCAAAAAGAGGACTTTGACTTGGTTAAACAGGTGGGCA
ATCAATTAAAAGTAAATATTCAACGCTATAAGGAGAAGAATCATGTTTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G9CHX9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

43.662

95.302

0.416